Pseudomonas cremoricolorata ND07, LK03_RS17265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata strain ND07, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCAGATGAACTTCGTCGACAACCAGGTCAACCCGCGCACCGGCACCATCCGTGGCCGTGCGGTGTTCGACAACCGCGACGGTGCCTTCACCCCAGGCCT GTACGCCCGCCTGAAACTGGTCGGCAGCGCTGAGTACGATGCCGTGCTGATCAACGATGAAGCGGTTGGCACCGACCTTGGCAAGAAATTCGTCCTGGTG ATGGACAAGGACAACACCGCCGACTACCGCGCCGTGGAACTGGGGCCCAAGCTCGAAGGCCTGCGCATCGTGCGCAGTGGCCTGGCCAAGGACGAACGCA TCGTGGTCAAGGGCCTACAGCGCGTACGCCCCGGTTCGGCAGTGACGCCCAAGGACGCACCGATGGCCAGTGACGCGACCCTCGCCGCCCTCGCCCGCCA ACGTCAGGCGCTGGAGGCCAACCGTGAGGCGCCCTCAGCGTCCGGGCATGCCGTCAATGTTGCCAGTGCCTCGGCACCACGCGGTTAAGGACTCACTCCG
DNA Sequence for Gene
>LK03_RS17265
ATGAATTTCTCACGCTTCTTCATCACTCGGCCGATCTTCGCCGCAGTGCTCTCGCTGGTGCTGCTGATCGCAGGCTCCATCGCGCTGTTCCAGTTGCCGA TCAGCGAATACCCGGAAGTGGTCCCGCCGACCGTCGTGGTGCGTGCCAACTTCCCTGGTGCCAACCCCAAGGTCATCGGCGAAACCGTCGCCTCGCCGCT CGAGCAGGCCATCACCGGGGTCGAGAACATGCTCTACATGTCGTCCCAGGCCACGGCCGACGGCAAGCTGACCCTGACCATCACCTTCGCCCTGGGCACC GACCTGGACAACGCTCAGGTGCAGGTGCAGAACCGCGTGACCCGCACCCAGCCCAAGCTGCCCGAGGAAGTCACGCGTATCGGCATCACCGTCGACAAGG CTTCGCCCGACCTGACCATGGTCGTGCACCTGACCTCGCCGGATCAGCGCTACGACATGCTGTACCTGTCCAACTACGCCATCCTCAATGTCAAGGATGA GCTGGCGCGGCTCAATGGCATCGGCGATGTGCAGCTGTTCGGCATGGGCGACTATTCGCTGCGGGTCTGGCTCGACCCGAACAAGACTGCCTCGCGCAAC CTGACTGCCAGCGACGTGGTCAATGCCATTCGCGAGCAGAACCGCCAGGTCGCCGCCGGGCAGCTCGGCGCGCCGCCAGCCCCCAACGCCACCAGCTTCC AGCTTTCGGTCAACACCCAAGGCCGCCTGGTGAGCGAGGAGGAGTTCGAGAACATCGTGGTGCGCGCCGGCGACAACGGCGAGATCACCCGCCTCAAGGA CGTCGCACGGGTCGAGCTGGGCTCCAGCCAGTACGCCCTGCGTTCGTTGCTCAACAACCAGCCGGCCGTGGCCATTCCAATCTTCCAGCGTCCGGGCTCC AACGCCATCGACATCTCCGATGAGGTGCGGGCGAAAATGGCCGAACTGAAGAAGGACTTCCCCGAGGGCATGGACTACAGCATCGTCTATGACCCCACCG TGTTCGTGCGCGGCTCCATCGAAGCGGTGGTGCACACGCTGTTCGAAGCGCTGATTCTGGTGGTGCTGGTGGTGGTGCTGTTCCTGCAAACCTGGCGCGC CTCGATCATTCCGCTGCTGGCGGTGCCGGTTTCGCTGATCGGGACTTTCGCGGTGATGCACCTGTTCGGCTTCTCGCTCAACGCGCTGTCATTGTTCGGC CTGGTGCTGGCCATCGGCATCGTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGCAACATTGGCCTGGGCCTCAAACCGCTGGAAGCCACGC AAAAGGCCATGGGCGAGGTGACCGGGCCGATCATCGCCACCGCCCTGGTGCTGTGTGCGGTGTTCGTACCGGCGGCGTTCATTTCCGGGCTGACCGGACA GTTTTATAAGCAGTTCGCCCTGACCATCGCCATTTCCACGGTCATCTCGGCGTTCAACTCGCTGACCCTGTCGCCCGCGCTGGCTGCCGTACTGCTCAAA GACCATCACGCACCCAAGGACCGTTTCTCGCGCCTGCTCGACCGGCTGCTGGGCAGCTGGCTGTTCGCCCCGTTCAATCGGTTCTTCGAACGTGCCTCGC TGCGTTATGTGGGTGGCGTGACCCGGGTCATCCGCTCCAGCGGCATTGCCCTGTTCGTTTACGCCGGGCTGATGGGCCTGACCTACCTGGGCTTCGCCTC GACCCCCACTGGCTTCGTTCCGGCGCAGGACAAACAGTACCTGGTGGCGTTCGCGCAACTGCCCGACGCCGCCAGCCTCGACCGCACCGAAGCGGTCATC AAGCGCATGAGCGAAATCGCCCTCAAGCAACCGGGCGTGTCCGACTCGGTGGCCTTCCCGGGGCTGTCGATCAACGGCTTCACCAACAGCCCTAACAGCG GCGTGGTGTTCACCCCGCTGAAACCGTTCGACGAACGCACCGACCCAAGCCAGTCGGCCGGGGCCATCGCCGCCGCGCTGAACGCGCAATTCGCCGATAT CGAAGACGCCTACATCGCCATCTTCCCACCGCCGCCGGTGCAGGGCCTGGGCACCATCGGCGGCTTCCGCGTGCAGATCGAAGACCGCGGCAACCTCGGC TATGACGCGCTGTACGCCGAAACCCAGAACGTCATCGCCAAGAGCCACGAGGTGCCGGAGCTGGCCGGGCTGTTCACCAGCTACCAGGTCAACGTGCCGC AGGTCGATGCTGCCATCGACCGGGAAAAGGCCAAGACCCATGGCGTTGCGATCAGCGATATCTTCGACACCTTGCAGATCTACCTGGGCTCGCTGTACGC CAACGACTTCAACCGCTTTGGCCGCACCTATCAGGTCAACGTCCAGGCCGAGCAGCAGTTCCGCCTCGACGCCGAGCAGATCGGCCAGCTCAAGGTGCGC AACGACCGTGGCGAAATGGTGCCGCTGGCCAGCTTCCTCAAGGTCAGCGACAGCGCAGGGCCGGACCGCGTCATGCACTACAACGGTTTCATCACCGCGG AAATCAACGGCGCGGCGGCGCCCGGCTATAGCTCAGGCCAGGCCGAGGCGGCCATGGAACGCCTGCTCAAGCAGGAACTGCCCAACGGCATGGTGTTCGA GTGGACCGACCTGACCTACCAGCAGATTCTGTCCGGCAACACCGCGCTGCTAGTGTTCCCGCTGTGCGTGCTGCTGGCGTTCCTGGTGCTGGCCGCGCAA TACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCCATCACCGGGGTGATCCTGGCCGGTAGCGACAACAACA TCTTCACCCAGATCGGCCTGATCGTGCTGGTGGGTCTGGCGTGCAAGAACGCCATCCTCATCGTCGAGTTCGCCAAGGACAAGCAGGCCGAGGGCCTCGA CCCGCTGGCTGCGGTGCTGGAAGCCTGCCGCCTGCGCCTGCGGCCGATCCTGATGACCTCCATCGCCTTCATCATGGGCGTGGTGCCGCTGGTGCTGTCG TCCGGCGCCGGTGCCGAAATGCGCCATGCCATGGGTGTGGCGGTGTTCTCCGGGATGATCGGGGTGACCTTCTTCGGCCTGTTCCTGACCCCGGTGTTCT TCTTCCTCATTCGCCGTTACGTCGAGCGCCGCGAGGCGCGCAAGGCCAGCCACGCGCCGGCGCTGGAGAGCCATCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTGTTGAAAGCCTTCGCCCCTGCCCTGCTGGCCCTGGCCGTGTCTGCCTGTGCGGTGGGCCCGGACTACCGCGCACCGCAACCGGCCCCTGCGCAACT GGACACCCAGGCGCAGCGCTTCGACCGCAGCCGCTTCGAGGCGCAGTGGTGGCAGCAGTTTGACGACCCGGTGCTGAACCAGCTGGTCAGTGCCTCGCTG CAGGGCAACCGTGACCTGCGGGTGGCCTTCGCCCGGCTCAAGGCAGCGCGTTCGCTGCGCGAAGAAGCCAGCCTCGATCAGCTGCCTGTGGTCACCAGCC GCGCCAGCAGCGAAATCGGCAAGGGCCAGGTGCCGGGCCAGACCGAACGGCGGGTCAATCAGGAACGCTATGACCTGGGCCTGGACATGGCCTGGGAAAT CGACCTGTTCGGCCGCATTCAACGGCAGATCGAGGCCAGCCGCGCCCAGGAAGATGCCGCTGCGGCCGACCTGCAACAGTTGCAGGTCAGCCTGATCGCC
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MNFSRFFITRPIFAAVLSLVLLIAGSIALFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVENMLYMSSQATADGKLTLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYAILNVKDELARLNGIGDVQLFGMGDYSLRVWLDPNKTASRN LTASDVVNAIREQNRQVAAGQLGAPPAPNATSFQLSVNTQGRLVSEEEFENIVVRAGDNGEITRLKDVARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIDISDEVRAKMAELKKDFPEGMDYSIVYDPTVFVRGSIEAVVHTLFEALILVVLVVVLFLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPLEATQKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK DHHAPKDRFSRLLDRLLGSWLFAPFNRFFERASLRYVGGVTRVIRSSGIALFVYAGLMGLTYLGFASTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALKQPGVSDSVAFPGLSINGFTNSPNSGVVFTPLKPFDERTDPSQSAGAIAAALNAQFADIEDAYIAIFPPPPVQGLGTIGGFRVQIEDRGNLG YDALYAETQNVIAKSHEVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLDAEQIGQLKVR NDRGEMVPLASFLKVSDSAGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAMERLLKQELPNGMVFEWTDLTYQQILSGNTALLVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQAEGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMIGVTFFGLFLTPVFFFLIRRYVERREARKASHAPALESHP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site