Pseudomonas cremoricolorata ND07, LK03_RS15620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTCCTGGAAATCAGCGAAGCAGAATGGGACCGCATCATGGCGGTGAACGTCAAGAGCATGTTCCTAGTCACTCAGGCGGTGTTGCCAGGGATGATTGC AGCCGGCGGTGGCAGCATCGTATGCACATCCTCCATTTCGGCCATGGTCGGCACACCCATGGAAGTCCTCTACTGCACCAGCAAAGGTGCGACGCACATG TTCGCAAGGGCGATCGCGGTTGAGTTCAGAGATCGAGGCATCCGCTCCAACGCGATTTGTCCCGGCTTCATTGCGACAGCACATGGTCTGCGGGAGATCG AGACCTTGCAAAAGCACGGGGTGGACGTTACCGAGGAAGCCATTGCGGCTGCGCAGGGTCGTCTTTGCAAACCTTCCGAAGTGGCTACAGCAGCACTCTT TCTCGCCAGTGATGATGCTAGCTTCGTGAATGGAGCACATTTGTTCGCCGACAATGGCTACACCGCAATTTAATCATGGGAAAATGGCAGGAGATCCATC
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| DNA Sequence for Gene |
>LK03_RS15620
GTGACAACATCTTCGAACAACATGCACATCAACGAGTTCGGACTCGAACACGCCCACTGGCGTAACTGGGCGGGTAACCAGTCCTGCATCCGTTCAGCAC GCGGCGCGCCCACGAGCGAGGATGAGCTTTGCTCGATGGTCAACGATGCCTCCAGAAAAGGCATGAACGTGCGTGTGGCCGGCTCTGGCCACTCCTTCAC CGCCGTGGCACTCACCAATGGATTGCACCTCACGCTGGGCAATATGTCCGGTGTGCGTCACATCGATTACGACAAGAAGCGAGTCACCGCTTCTGCGGGT ACAACCATCAACGCCTTCGGGAAAGCCTTGCGCGAGGCCGGTCTGTCGATGGTTAACCAGGGCGATATCGATAGCCAATCGATCGCCGGGGCACTGACCA CTGGCACTCATGGCACGGGCCTAACCCTTGGTAACCTGGCGTCGTCTATTGTGGGTATGAAACTGGTTCAGCCAGATGGTCGCATCATCGTCGTCGACGA GAGCACCCCGGACCTTCTGCACGCTGGCCGCGTGTCGATGGGCGTGCTCGGGATTGTCTCCGAGATCACCCTGAAGGTAACCGACAGCTTCAACTTGCAC GAGCGCATCTGGCGTGAAGACTTCGAAAGCGTCATGGAAAAGCACGATGAGCTCGCCCGCACGCACCGGCACTTCAGCTTCTTCTGGTGTCCGTATGAAC AGAGCCGGCATTGCTATTGTCTGCCGGATACTGCTGCGACTTCGAAGACTGGCCGAACCACCGATGTCTGCGAAGTGAAGGTGATGGACATCACTGATCG CGCGCCCTTCGAAAGCCCATTCGAAAAAGTCGCCTACAGCTCGGATGTGTACCCGATCGAATATTTGCCGAACTTCCACGAACTGGAATACGCGGTGCCG ATCAAGTACTGCAAGGAGGCGCTGCGGGCGGTTCGCAAGCTGATGCTTGAGGACTTCCCCCAAGCCATCTACCCCATCGAGTACCGTTTTACTGCCGGGG ACGGAGCTTGGATGAGCCCGTTCTTTGAGCAGGACAGTGTGACCATCTCGGTGTCAGGCCAGCCAGGGACCGACTACTGGGACTACCTACGTGCGGTTGA TGCAATCCTTCGCGCCTATGGTGCCAGACCGCACTGGGGCAAGCTGCACTTCTTGACCGGCGATGACGTAACGGGGATCTACCCGCGTGCCACCGACTTC CGGCAACTTCGACGCGAGCTCGATCCGCAAGGCATCTTCCTCAGCGAACACCTCAGTCCCTACTTCAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTATCGGCCTTTGAGCATCTCAGCGGCTTAGCAACCACCAGCTTGCTGAGATGCAGACGCTTAGAACGGTATGTCGAATTGGTGACGACATGAAGTGCGG GACATTTCATCCCTATCGGTACCAGTTGATGTATCCGACGCTGAAAACCTTGATCATCCCCACGATCTTGGCAGTGCACTCCGGAAGAGGCGCCTACCTG TGCTGGGTGAAGGTAAACTCCTGCTCCATGACTTTTACGAACGCAATCAGCCAGTTAACGCCACGTATATCGGTCGATATATAGACACCTCCGGCACAAT GGATCTAGCCTGACGTCGGCGCATTCGCGAGCACCAATCAAAACAAGAACGACTACATCCTTTCAGTCCTGCCATTCCACAACACGTACAAGAATGAGGC AGCAAATGGAAAACATAGGCACCTACGTCATCTATGTGATTATGGTGTGTGCCGTCATCGGCGCCATAGCATCCATGATCAATCCGGAAGGCGAGTTGGG
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| Amino Acid Sequence |
>FAD-dependent oxidoreductase
MTTSSNNMHINEFGLEHAHWRNWAGNQSCIRSARGAPTSEDELCSMVNDASRKGMNVRVAGSGHSFTAVALTNGLHLTLGNMSGVRHIDYDKKRVTASAG TTINAFGKALREAGLSMVNQGDIDSQSIAGALTTGTHGTGLTLGNLASSIVGMKLVQPDGRIIVVDESTPDLLHAGRVSMGVLGIVSEITLKVTDSFNLH ERIWREDFESVMEKHDELARTHRHFSFFWCPYEQSRHCYCLPDTAATSKTGRTTDVCEVKVMDITDRAPFESPFEKVAYSSDVYPIEYLPNFHELEYAVP IKYCKEALRAVRKLMLEDFPQAIYPIEYRFTAGDGAWMSPFFEQDSVTISVSGQPGTDYWDYLRAVDAILRAYGARPHWGKLHFLTGDDVTGIYPRATDF RQLRRELDPQGIFLSEHLSPYFK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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