Pseudomonas cremoricolorata ND07, LK03_RS12930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata strain ND07, complete genome. [Details]
DNA Sequence Upstream of Gene
ATGCGGCGCGTCTGGGCCGTTCCAGATTTCCGGCCAGCCGAAAAGGGTCAGCGCCGCGCCCGACAAGCGGCCCTGCGCCGCCTTGGCCAGGTCGAACTGA CCGGGTCCGGACTTATCCGCCTCACGCCCCTCGGTGCCGAAGCTCAGCGGCAAGGTGATATGGCTGTCGAACGAGATCAGCCGTTCCTGCAGTTCATTGG CCTGGCGCACTACTTTTGCCGGGTAGGCCGGGGTCGGCTCGAGCAGACGCCAGGCGACATAACCACCTACCCCGAGCAGCAGCGCCAGGGGCAGGCCGAA ATACAGGGTCTTGTTGCTGCGCGATCTTGTCATTGCCATCTCGATACGGGTCACGGATGCGGGGCCTGGGCTATCAGGGGAGGACGAGCATGGCGCGGGC AAATTTACCGGGCGCTGGGCGGTCGGCCCGCTAAATTTGCCGGCCCAGCGTACGTTCTTGCTGGGATGGCGCCTGCTTCATGGCGAACACAGGTGGGGTG
DNA Sequence for Gene
>LK03_RS12930
ATGACGATTTCTCGACGCGGCTTCATGGCCGCTGCAGCGCTGCTGGGCGCTGCCGTGCCGGCGAGCTACTACGGCCACCGCGAACTGACCAGGCCGGACG ACGAGGAACCGGAGACCCCCGGCGAAGCCACGGTGGACCTGGCTGACGTGGCCGAACAACACCTGGCCAACCGCTTGCGCGGCATCTGGGACCTGCGCCT GTTCGGCCATGACGCCGGCTTGCCCGGCGTGCCCGAGCAGCCGCTGCAACTGTTCATCGACATCGCCGCCCGCGGCCGCGGCATCCGCGGCTGCCTCGAC ACCCCCGAGCGCCTGCGCGGCGAGCCGGCGCCGGCCTATCAACTGATCGGTGACCTGCGCCGCGACGATGCCGGCCTGCTTTACTGGCGCCTGGTGCCGG CCAACACCAGCGCGCCGCGCTGGGAGCTGGCGATCAAGATCGACGAGGTCTGGGATCAGTTCGGCAACGCTGGCAGCGACACCTTCAGCGGCCAGGTGCT CGACCTGCAACGGCCGCTGGCCCTGGCCGAGCAGGACAACCGCTTCGTCGCCACCAAGCAGCTGTTTCCCGAGGCACGCCTGCGCACCGGGCTGGAGCCA GTGTTGCTCGACTGGCTGATCTCGCCTGAACACCGCCTGTTCCACCAGCTCTGGCACGCCAGCCGCGACCAGTGGCACAAGCTGCCTGAAGACAAACGCG AGGCCCTGCGCGGCCTGGGCTGGCAGCCAGGGCCGCGCAGCCGCGAACGCGACGCCCGTGGCCGGCACAAGGACCGCAATGGCTCGGGCGTGGACTTCTT CTTCATGCACCGGCACATGCTGGCCAGCGCCCGCGCCTTGCAGCCGCTGCCTGCCTGGCAGCACTTCCCCTTGCCGCAGCCGCCGCTGGAGCGCGACCGA TTGGGCTTCGCCCGTTATTTCGACAACCATGACGGCAACGCCTTGCCACCGACCTGGCTGGCCGACGAGGACGAGACCTACACCGAGTGGGTCAGCGGCA TCAAGCGCGAAGAAACCTTCCACGCCAACTTCGCCCTGTGGGAATCGCAGTACCGTGATCCGCGCTACTTGGCCGGGCTGACCCTGGGCCAGCTCGGCTC GGAAATGGAACTGGGCCTGCACGACTGGCTGCACATGCGCTGGGCGGCCGTGCCGCGCGATCCGTCCAGTGGCGTGCCGGTGCCCTATGGGCGCAGCCAG GACGACTTCGCGCCGCGCTGGTTCAGCGCCGAGAACGACTTTCTCGGCGACCCGTTTTCCTCCCACGTGCACCCGGTGTTCTGGCGCTTCCACGGCTGGA TCGACGACCGTATCGACGACTGGTTCGCCGCCCACGAACGCTTCCACCCCGGCCAGGTACGGCGCTTGGTGGTCAATGGCGTGGCATGGTTCGCCCCGGG CCGCTGGGTCGAAGTGGCTGACCCATGGCTGGGCCCGGACACCCACGGCTGCAGCAGCGTGCCAGGGGTGCGGCCGGGCAAGTCGGTGGAAATGGACGTC GAGACCATGAAGCTTGCGCTGCGCATCATCTTCGCCAATGAAGATGACGGCATCGCCGGGCTGGTGCGGCGCGTGCCGAAGCGGCCGTGGTATGCGCGGC ATCTGTCAGTGGCTGGCATGGATTTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCGCTCAGCCCTCTGGCGTTTCGCCGCCGACCTGCGCCACCTGCCAGCCACCGCCCAGGGCCTTGTACAACGCCACGCTGCCTTGCAGGCGTTCGAGG CGCAGGCGCGCTTGTTGGTCCTGGGCGGCGAACAGCGTGCGCTGCGCCTCCAGCACCACCAGCAGGGTTTCCGCACCGGCCCTGTAGCGTTGCTGGGCGA GGTCGAAGGCCAGTTGCGCCTGCGCCACCTCTTGGTCCTGCCACTGCCGTTGACGATCGACCCCAGCAATTGTGTTGAGGGCTTTCTCGACATCAGCGAA GCCAGCAGTGATGCCTTTGCGGTAGTCCTCCAGCAGCTCCTGCTGGCGAGCGTGGGCTTTGTCGCGCTCGGCGCGCAGTCGGCCATGGTCGAAGATCGGC GCGGCAAGGCCGGCAGTGAGGGTATAGAACGGGCTGTCGAGCACCGCTGGCAGGGTGCGCGCGCCGCTGCCCAGGTTGGCGCCGAGCAGCAGTTTGGGCA
Amino Acid Sequence
>PvdJ/PvdD/PvdP-like protein
MTISRRGFMAAAALLGAAVPASYYGHRELTRPDDEEPETPGEATVDLADVAEQHLANRLRGIWDLRLFGHDAGLPGVPEQPLQLFIDIAARGRGIRGCLD TPERLRGEPAPAYQLIGDLRRDDAGLLYWRLVPANTSAPRWELAIKIDEVWDQFGNAGSDTFSGQVLDLQRPLALAEQDNRFVATKQLFPEARLRTGLEP VLLDWLISPEHRLFHQLWHASRDQWHKLPEDKREALRGLGWQPGPRSRERDARGRHKDRNGSGVDFFFMHRHMLASARALQPLPAWQHFPLPQPPLERDR LGFARYFDNHDGNALPPTWLADEDETYTEWVSGIKREETFHANFALWESQYRDPRYLAGLTLGQLGSEMELGLHDWLHMRWAAVPRDPSSGVPVPYGRSQ DDFAPRWFSAENDFLGDPFSSHVHPVFWRFHGWIDDRIDDWFAAHERFHPGQVRRLVVNGVAWFAPGRWVEVADPWLGPDTHGCSSVPGVRPGKSVEMDV ETMKLALRIIFANEDDGIAGLVRRVPKRPWYARHLSVAGMDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site