Pseudomonas cremoricolorata ND07, LK03_RS12540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psw02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psw02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 149 183 -
FunFam G3DSA:3.40.50.180:FF:000001 Protein-glutamate methylesterase/protein-glutamine glutaminase - - 183 375 2.6E-96
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 194 370 8.4E-59
PIRSF PIRSF000876 RR_chemtxs_CheB IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 375 0.0
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 187 373 1.7E-67
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 109 1.2E-21
CDD cd16432 CheB_Rec IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 193 372 3.45328E-96
PANTHER PTHR42872 PROTEIN-GLUTAMATE METHYLESTERASE/PROTEIN-GLUTAMINE GLUTAMINASE - - 1 374 3.3E-127
CDD cd17541 REC_CheB-like - - 3 127 1.4445E-62
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 3 122 3.9E-24
FunFam G3DSA:3.40.50.2300:FF:000077 Chemotaxis response regulator - - 3 129 9.1E-60
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 189 373 7.98E-64
Hamap MF_00099 Protein-glutamate methylesterase/protein-glutamine glutaminase [cheB]. IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 3 375 39.191196
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 109 9.25E-28
Gene3D G3DSA:3.40.50.2300 - - - 2 136 9.4E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.