Pseudomonas cremoricolorata ND07, LK03_RS12325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0071973 | bacterial-type flagellum-dependent cell motility |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01395
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0030694 | bacterial-type flagellum basal body, rod |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01395
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psw02040 | Flagellar assembly | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30435 | FLAGELLAR PROTEIN | - | - | 6 | 143 | 2.4E-14 |
| NCBIfam | TIGR01395 | JCVI: flagellar basal body rod protein FlgC | IPR006299 | Flagellar basal-body rod protein FlgC | 5 | 147 | 2.1E-49 |
| Pfam | PF06429 | Flagellar basal body rod FlgEFG protein C-terminal | IPR010930 | Flagellar basal-body/hook protein, C-terminal domain | 99 | 145 | 6.5E-13 |
| Pfam | PF00460 | Flagella basal body rod protein | IPR001444 | Flagellar basal body rod protein, N-terminal | 7 | 34 | 3.3E-8 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.