Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAGCGTCTGTGTGGGCTCAAGAGCCGTACCTTCCTCGCCGAACTGATGCCGCACTATCCGATCTACGTGCCCTTGCTGCCGGACAAAGCCCAGGAAGCCA TGGGCCAGGTGCATCCGCGGGCGCAGATCACCTTCGACATTCTCATGCGTGAAGGCTTCGAAACCGAGCACTACATCGACATCTTCGATGGTGGCCCGAC CCTGCACGCGCGCACGTCGGGCATTCGCTCGATTGCCCAGAGCCAGGTGGTCGCAGTCGATGTGCAGGCAGGCACGGCTGGCGGCACGCGTCCGTACCTG GTGTGCAACGGCCAGTTGCAGGAGTTTCGCGCCGTGGTCCTGGAACTCGACTGGAGCCCCGGGCAGCCGCTGGTCCTGAGTATCGAAGCCGCCGATGCGC TGGGTGTGGGCGATGAAGACAGCGTGCGCCTGGTTGCCGTCTGAGCGCCTGGCTACAGTGAGTTTTGCGGCAGGCACCGGCCACCGCACAAGGAGATAGC
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DNA Sequence for Gene |
>LK03_RS12110
ATGATCGTTCGTCCCGTCCGCAGCAGCGACCTGCCCGCGCTGATCGAGTTGGCCCGCAGTGCCGGCACCACCGGGTTGACTACCTTGCCCGCCAACGAAG AGCGCCTGGCTCACCGTGTGACACTGGCTGAGAAGAGCTTTCGCGGCGAGCTGGAGCGGGGTGACGCCGATTATCTGTTCGTGCTGGAAAACGACGAAGG CCTGGTGATCGGTATTTCCGCCATTGCCGGCGGTGTCGGCCTGCGCGAGCCCTGGTACAACTACCGGGTCGGGCTGACCGTCAGCGCCTCGCAGGAGCTG AAGATCTTCCGCGAGATTCCCACGCTGTTTCTGGCCAACGACCTCACCGGCAATTCCGAACTGTGTTCGCTGTTTCTGCGCGGCGATTACCGCAGCGGCC TGAACGGCGGCTTGCTGTCCAAGGCGCGGTTGTTGTTCATCGCCGAGTTCAGTGAGCTGTTCGGCAAGAAGGTCATCGCGGAAATGCGCGGCATGTGTGA CGCCTCGGGGCGTTCGCCGTTCTGGGAGAGTCTGGGGCGGCATTTCTTCAAGATGGAATTCAGCCAGGCCGACTACCTCACCGGCATCGGCAATCGCGCC TTCATCGCCGAGTTGATGCCGCGCTTCCCGCTGTACACCTGCTTCCTCTCGGAAGCGGCGCGCAGCGTCATTGGCCGGGTGCACGCCGATACCGAGCCCG CGCTGGCGATGCTCGAGCGCGAGGGTTTCACCCACCAGGGCTACGTCGACATTTTCGACGCCGGCCCTGCTATCGAATGCGAAACCGCGAAGATTCGCGG CGTGCGTGACAGCCAGACCCTGGTGCTGGCGGTCGGTACGCCTGGCGACGATGCCACGACCTACCTGATCCACAACCGCAAGCGTGAAGACTGCCGCATC ACCGCAGCACCGGCACGCTTTGCCGCAGGCACCCTGGTGGTCGATCCGCAGGCTGCCAAGCGCCTGCGTCTGGGCGCTGGCGACCACGTGCGTGCGGTAC CACTGTCGGTGCCCAAGGAGCCTCGGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCACCCACTACCTCGGCGGCCACTGGCAGGTCGGCCAGGGCAGCCCGTTGCAATCACTCAATCCGGTGACCCAGGCCGTGCTGTGGCAGGGCCAGAGCGC CTCGGCAGGCCAGGTGGAGGCGGCGGTCCGGGCGGCGCGCGAGGCGTTCCCGGCCTGGGCGCAACTGGGTCTCGAGGCCCGGATCAAGCTCCTCGAAGCC TTCGCCGAACAGCTCAAGGCCAATGCCGAGCTGCTGGCCCACTGCATCGGTGAGGAAACCGGCAAGCCGCTGTGGGAGGCTGCCACCGAAGTCACCAGCA TGGTCAACAAGGTGGCGATTTCCGTGCACAGCTACCACCAGCGCACCGGCGAGAAACAGGCGCCGCTGGGCGATGCAACGGCCGCGCTGCGGCACAAGCC GCACGGGGTGGTGGCGGTGTTCGGCCCTTACAATTTCCCTGGGCACCTGCCCAATGGGCACATCGTTCCGGCGCTGCTGGCGGGTAATTGCGTGGTGTTC
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Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVRSSDLPALIELARSAGTTGLTTLPANEERLAHRVTLAEKSFRGELERGDADYLFVLENDEGLVIGISAIAGGVGLREPWYNYRVGLTVSASQEL KIFREIPTLFLANDLTGNSELCSLFLRGDYRSGLNGGLLSKARLLFIAEFSELFGKKVIAEMRGMCDASGRSPFWESLGRHFFKMEFSQADYLTGIGNRA FIAELMPRFPLYTCFLSEAARSVIGRVHADTEPALAMLEREGFTHQGYVDIFDAGPAIECETAKIRGVRDSQTLVLAVGTPGDDATTYLIHNRKREDCRI TAAPARFAAGTLVVDPQAAKRLRLGAGDHVRAVPLSVPKEPRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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