Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACCAGCAGGACGCGTTCGGCCTTGAGCCCCGGCAGACTGTGCAGCAGCAGGGTCTGGCCTGGCTTGCCGCTGAGGTCGCCACGCTTGAGCACGGCGCTG ATGGCGCCGCTGCTGGCCAGATCGATGGCCTGGGCGGTATCGCCGAGGATCCGGCCTTCGCCCACGGCGAGCACCAGCGTTGCAGTTTTCACGGATGCAG CGTTGAGGCTCTTTACAACCAGTTCCATAGTTCGCTCCCCAGTAGATCGTGCGATCGGCGCGGTGCCGTGCAAGCCTGGCCGCGTGTCGCGGTCCAGTGG AAAAGCTGCCAGTTTGAGCCTGTGGCCGCCATGCTGACAACCCCGAGCTGCGCGGCTGCAAGCGGCCAAGTGACAGGCACGGTCAATCACAGGATAATGC GCCCACTTTCAGTCGGCTGGCTCAGGCGAACCGGCTATGATCCTGATGGTCCGATTTTCTTGTCTGGCACTTCGCCCCTGACAACCCAGGAGTTTCTGGT
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DNA Sequence for Gene |
>LK03_RS10155
TTGATCGTCTTCCGTTATCTGTCTCGCGAGGTCCTGGTGACCTTGAGCGCCGTCAGCGCCGTGCTGCTGGTGATCATCATGAGTGGGCGCTTCATCAAGT ACCTGGCCCAGGCGGCCCAGGGCGTACTCGATCCCGGCGTGCTGTTCCTGATCATGGGCTTCCGTCTGCCCGGGTTCCTCCAGCTGATTCTGCCGCTGGG TCTGTTCCTCGGCATCCTGCTGGCCTATGGCCGGTTGTACCTGGAAAGCGAAATGACCGTGCTGGCGGCCACCGGGATGAGCCAGCAGCGCCTGCTGGCC ATGACCATGGCGCCGGCCGGTCTGGTCGCGCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCGCCCCAGGGCGTTACGCAGGTGCAGCAAATCATCAATC AGCAGGATGCCCTGACCGAGTTCGACACCCTGGTGCCCGGACGCTTCCAGACCCTGCGCGATGGCACCCGGGTGACCTACACCGAGCAGCTGTCCGATGA CCGCGTCAAGCTCGATGGTGTATTCATCTCCGAGAAGCGCTTCAACCAGGACAAGAGCAAGGACCGTCCGCCGACCGTACTGGTCGCCGAGCGGGGCCAC CAGGAAGTGCAGGCCGACGGTAACCGTTACCTGGTGCTGGAAAATGGCTATCGCTACGACGGCAATCCCGGCGAAGCCGGTTACCGTGCGATCAAGTACG ACACCTACGGCGTGTTGCTGCCCAAGCCTGAAGTCAACGAAGAAGTCACCGAGCGCGAGGCCATTCCGACCCTGCAACTGTTCGGTGAGGACGGTTTGCG CGAGCGGGCCGAGCTGCAGTGGCGCCTGTCGCTGCCGATTCTGGTGTTCATCGTGACCCTGATGGCCGTACCGCTGGCACGGGTCAATCCGCGTCAGGGT CGCTTCCTCAAGCTGCTGCCGGCGATTCTTCTGTACATGGCCTACCTGACGATGCTGATTTCCGTACGCGGCGCCCTGGAGAAAGGCAAGTTGCCGATCG CTCTGGGCATGTGGTGGGTGCATGGCCTGTTCCTGATGATCGGCCTGGCCCTGATGTACTGGGAACCGCTGCGCCTCATGCGTGCTGCCCGTCGTGCGGA GGTGGCCCGTGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTCGATCGCTACATCGGCCAGAGCGTTCTGCTGGCCATTCTGGCGGTACTGGGAATCATCCTTGGCCTGGCCTCGTTGTTCGCCTTCATCGATGAAATG GGTGATCTGAGCAACACCTACAGCCTGGGCGACGCCTTGATGTACGTGCTGCTGACCGCGCCCCGGCGGGTCTACGACATGCTGCCCATGGCCGCGCTCA TCGGCTGTCTGATTGGTCTGGGCAGCCTGGCCAGCAGCAGCGAACTGACCATCATGCGGGCGGCCGGGGTGTCCATCGGGCGCATCGTCTGGGCGGTCAT GAAGCCCATGCTGGTGCTGATGCTGGCCGGTGTGCTGATCGGTGAGTACGTCGCTCCGGCGACCGAAAACAAGGCCCAGGCTGATCGCTCCCTGGCTCAA GGGGGCGGTGAAGCGCTCAGTTCCAAGCGCGGCATGTGGCATCGCCAGGGCGAGGAGTATGTGCACATCAACTCGGTTCAGCCCAACGGCCTGCTGCTGG
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Amino Acid Sequence |
>permease
MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQLILPLGLFLGILLAYGRLYLESEMTVLAATGMSQQRLLA MTMAPAGLVALLVAWLSLSLAPQGVTQVQQIINQQDALTEFDTLVPGRFQTLRDGTRVTYTEQLSDDRVKLDGVFISEKRFNQDKSKDRPPTVLVAERGH QEVQADGNRYLVLENGYRYDGNPGEAGYRAIKYDTYGVLLPKPEVNEEVTEREAIPTLQLFGEDGLRERAELQWRLSLPILVFIVTLMAVPLARVNPRQG RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVHGLFLMIGLALMYWEPLRLMRAARRAEVARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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