Pseudomonas cremoricolorata ND07, LK03_RS06480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psw02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00173 Glutamate-aspartate symporter signature - - 34 53 4.8E-5
FunFam G3DSA:1.10.3720.10:FF:000002 D-methionine ABC transporter permease MetI - - 11 223 8.2E-88
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 13 210 4.71E-41
PRINTS PR00173 Glutamate-aspartate symporter signature - - 159 178 4.8E-5
PANTHER PTHR30450 ABC TRANSPORTER PERMEASE - - 6 222 3.6E-74
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 56 168 4.97718E-8
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 45 211 8.0E-17
PRINTS PR00173 Glutamate-aspartate symporter signature - - 61 80 4.8E-5
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 12 220 1.2E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.