Pseudomonas cremoricolorata ND07, LK03_RS06180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGACCGATCCTGAGGGCATGGTCAGCATTGTCTTGGGCCAACACCATATCCGCGCGACCACAGGCGAATTCACCTTCACCTCCAAGCTGGTCGATGGGA AGTTCCCGGACTATGAGCGCGTTCTGCCCAAGGGCGGTGACAAGTTGGTGCTGGGTGATCGCCAGGCCCTGCGTGAAGCCTTCAGCCGCACTGCCATCCT GTCCAACGAGAAGTATCGAGGCATTCGTCTGCAACTCGCCGCTGGCCAGCTGAAGATTCTTGCCAATAACCCTGAACAGGAAGAAGCGGAAGAAGAAATC AGCGTCGACTACAACGGCAGCTCGCTGGAAATCGGCTTCAACGTGAGCTATCTGCTCGACGTCTTGGGCGTGATGACCACCGAACAGGTCCGCTTGATCC TGTCCGACTCCAACAGCAGTGCGCTTCTGCAAGAAGCAGGCAACGATGATTCCTCCTATGTCGTCATGCCGATGCGTCTGTAACTGAATAGACGCCCTCC
|
|
| DNA Sequence for Gene |
>LK03_RS06180
ATGTCGCTTTCACGCGTTACAGTCACTGCGGTGCGCAACCTGCACCCAGTGACGTTCTCCCCTTCCCCCCGAATCAACATCCTCTACGGCGCCAACGGCA GCGGTAAAACCAGCGTGCTGGAAGCGGTTCATCTGCTAGGTCTGGCGCGCTCGTTTCGCAGCACTCGATTGACGCCCGTCATCCAATATGAACAACCCAA CTGCACGGTATTCGGTCAGGTTGAGTTGGCTAGCGGGGGCAGCAGTAATTTGGGTATTTCTCGTGAGCGCCAGGGCGATTTCACCATCCGCATCGATGGA CAGAATGCCCGCAGTGCGGCGCAACTTGCCGAGATTCTACCGCTGCAGTTGATCAATCCCGACAGTTTCAGGCTATTGGAAGGTGCGCCAAAGATACGCC GCCAGTTCCTGGATTGGGGAGTGTTCCACGTGGAACCTCGTTTCATGGCAACGTGGCAGCGCTTGCAGAAGGCACTCAGGCAAAGAAACTCATGGCTGCG GCATGGTACACTTGACGCCGCTTCGCAGGCTGCTTGGGACAGGGAATTGACCCTGGCCAGTGCGGATATTGATCAGTACCGCCGCGAGTACATCAAAGCC TTGAAGCCAGTTTTTGAAAAGACTTTGAGTGAGCTCGTTGAACTCGAAGGCCTGACCTTGAGCTATTACCGTGGTTGGGATAAAGATCGAGAACTTGCAG AAGTCCTCGCAGCCTCCCTCCATCGCGATCAGCACATGGGCCATACGCAAGCCGGTCCTCAGCGCGCGGATTTGCGCCTCAGACTAGGTGCCCACAATGC AGCCGATATTCTCTCGCGTGGCCAGCAGAAGTTGGTTGTCTGTGCATTGCGTATTGCTCAAGGTCATTTGCTTAACCAGGCACGCCGCGGCCAGTGCATT TATCTCGTTGACGATCTGCCGTCCGAGTTGGACGAGCAGCACCGCCGCGCACTATGTCGCTTGCTTGAAGAATTGAACTGCCAGGTTTTTATCACCTGTG TAGACCACGAATTTCTGAGGGAAGGCTGGCAAACGGAAACGCCAGTTGCTTTGTTCCACGTGGAACAAGGCCATATCACCCAGACCCACGACCATCGGGA GTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGCATGAGCGAAAATCAAACGTACGACTCTTCCAGCATCAAGGTGTTGAAAGGGCTGGATGCCGTGCGCAAGCGTCCCGGCATGTACATTGGCGATACC GATGATGGCAGCGGCCTCCACCACATGGTGTTCGAAGTAGTCGATAACTCTATCGACGAGGCGTTGGCGGGACACTGTGACGACATCACCGTCATCATCC ATCCTGACGAATCCATCAGCGTCCGAGACAACGGTCGGGGTATTCCGGTCGATGTCCATAAAGAAGAAGGTGTGTCTGCGGCAGAGGTCATCATGACCGT GCTGCACGCCGGCGGTAAGTTCGACGACAACTCCTATAAAGTTTCCGGCGGCCTGCACGGCGTAGGTGTTTCGGTGGTCAACGCCCTGTCCGAGAAGTTG ATCCTGACCGTGCGCCGCAGCGGCAAGATTTGGGAACAGACCTACGTCCACGGTGTTCCCCAGGAACCGATGGCGATCGTGGGCGAAAGCGAAACCACCG
|
|
| Amino Acid Sequence |
>DNA recombination protein RecF
MSLSRVTVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLTPVIQYEQPNCTVFGQVELASGGSSNLGISRERQGDFTIRIDG QNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAASQAAWDRELTLASADIDQYRREYIKA LKPVFEKTLSELVELEGLTLSYYRGWDKDRELAEVLAASLHRDQHMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLLNQARRGQCI YLVDDLPSELDEQHRRALCRLLEELNCQVFITCVDHEFLREGWQTETPVALFHVEQGHITQTHDHRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|