Pseudomonas cremoricolorata ND07, LK03_RS06175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGTTGCCCCACGACGCGGCATTCTTCATCGCCCAGCGCATCCGCTCCAACGTCCGGGAGTTGGAAGGTGCGTTGAAAAGGGTGATCGCTCACTCGCAC TTCATGGGTCGCGACATCACCATTGAGCTGATTCGTGAGTCGCTCAAAGACCTGCTTGCGTTGCAAGACAAACTGGTGAGTGTGGATAACATTCAGCGGA CCGTAGCCGAGTACTACAAGATCAAGATCTCTGATCTGTTGTCCAAACGCCGCTCACGTTCGGTAGCCAGGCCTCGTCAGGTCGCCATGGCCTTGTCCAA GGAGCTGACCAACCACAGCCTGCCGGAAATCGGCGATATGTTTGGCGGACGCGACCACACTACCGTGCTGCACGCGTGCCGCAAGATCAATGAACTGAAG GAATCCGACGCGGACATTCGCGAGGACTACAAGAACCTGCTGCGAACGCTGACCACTTGATGCGTTCGGGCATAGCTTATTGAAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>LK03_RS06175
ATGCATTTCACTATTCAACGCGAAGCTCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGTCGAGCGTCGTCAGACTCTGCCAGTTCTGTCAAACGTGC TGCTGGTCGTGCAAGGTCAACAACTGTCGTTGACCGGCACCGACCTGGAAGTCGAGCTGGTCGGCCGAGTGCAGCTGGAAGAGCCTGCCGAGCCTGGCGA AATCACCGTGCCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCCAGCGACATGCTGATCGATATCAAACTCGATGAGCAGAAGCTGCTGGTCAAG GCCGGGCGTAGTCGCTTCACTTTGTCGACTCTGCCAGCCAACGATTTCCCTACGGTCGAAGAAGGCCCAGGCTCGCTGACCTGCAACCTCGAGCAGAGCA AGCTACGTCGTTTGATCGAACGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGCTACTACCTCAACGGCATGCTGCTCGAAGTGTCAGCCGATACCTT GCGCGCCGTTGCTACCGACGGTCACCGATTGGCGCTGTGCGCGATGCAGGCGTCGATTGGCCAGGCTGACCGCCACCAGGTGATCGTCCCGCGCAAAGGT ATTCTCGAACTGGCGCGCCTGCTGACCGATCCTGAGGGCATGGTCAGCATTGTCTTGGGCCAACACCATATCCGCGCGACCACAGGCGAATTCACCTTCA CCTCCAAGCTGGTCGATGGGAAGTTCCCGGACTATGAGCGCGTTCTGCCCAAGGGCGGTGACAAGTTGGTGCTGGGTGATCGCCAGGCCCTGCGTGAAGC CTTCAGCCGCACTGCCATCCTGTCCAACGAGAAGTATCGAGGCATTCGTCTGCAACTCGCCGCTGGCCAGCTGAAGATTCTTGCCAATAACCCTGAACAG GAAGAAGCGGAAGAAGAAATCAGCGTCGACTACAACGGCAGCTCGCTGGAAATCGGCTTCAACGTGAGCTATCTGCTCGACGTCTTGGGCGTGATGACCA CCGAACAGGTCCGCTTGATCCTGTCCGACTCCAACAGCAGTGCGCTTCTGCAAGAAGCAGGCAACGATGATTCCTCCTATGTCGTCATGCCGATGCGTCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGAATAGACGCCCTCCATGTCGCTTTCACGCGTTACAGTCACTGCGGTGCGCAACCTGCACCCAGTGACGTTCTCCCCTTCCCCCCGAATCAACATCCT CTACGGCGCCAACGGCAGCGGTAAAACCAGCGTGCTGGAAGCGGTTCATCTGCTAGGTCTGGCGCGCTCGTTTCGCAGCACTCGATTGACGCCCGTCATC CAATATGAACAACCCAACTGCACGGTATTCGGTCAGGTTGAGTTGGCTAGCGGGGGCAGCAGTAATTTGGGTATTTCTCGTGAGCGCCAGGGCGATTTCA CCATCCGCATCGATGGACAGAATGCCCGCAGTGCGGCGCAACTTGCCGAGATTCTACCGCTGCAGTTGATCAATCCCGACAGTTTCAGGCTATTGGAAGG TGCGCCAAAGATACGCCGCCAGTTCCTGGATTGGGGAGTGTTCCACGTGGAACCTCGTTTCATGGCAACGTGGCAGCGCTTGCAGAAGGCACTCAGGCAA
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPSDMLIDIKLDEQKLLVK AGRSRFTLSTLPANDFPTVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSADTLRAVATDGHRLALCAMQASIGQADRHQVIVPRKG ILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKILANNPEQ EEAEEEISVDYNGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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