Pseudomonas cremoricolorata ND07, LK03_RS03000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACAACCCCAACCTGAAATTCCTGTTCATCTACGCGGTGCTGTTCCTGGTGGTGCTGGCGGTGCTGTACATCAAGCATCGCCTGACCCGCATGCCGGTCG GGCGGGCCTGGGAGGCGCTGCGTGAGGACGAGATCGCCTGCCGCTCGATGGGCCTGAACCACGTGCTGGTCAAGCTCTCGGCGTTCACCCTGGGCGCCTC CACCGCAGGGCTTGCCGGGGTGTTCTTCGCCACCTATCAGGGCTTCGTCAACCCGTCGTCGTTCACCTTCTTCGAGTCGGCGCTGATTCTGGCGATCGTC GTGTTGGGCGGCATGGGTTCGACGGTCGGCGTGGTCATCGCCGCCTTCGTGCTGACCGTAGCCCCCGAGCTGCTGCGCAGCTTCTCGGAATACCGCGTGC TGCTGTTTGGTGTGCTCATGGTGCTGATGATGATCTGGCGTCCACGCGGACTGATTCGCATAGGTCGCACCGGGGTGCCGGTGCGCAAGGGGGTGGCGCC
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| DNA Sequence for Gene |
>LK03_RS03000
ATGAACGACGAGATCGTGCTGTCGGTCGAGCACCTGATGATGCAGTTTGGCGGCATCAAGGCGCTCAGCGACGTCAACCTGCAAGTCAGGCGCAACCAGA TCTTCGCCCTGATCGGCCCCAACGGCGCGGGCAAGACTACGGTGTTCAACTGCCTGACCGGGTTCTACAAGGCTAGCGGCGGGCGCATCGAGCTGAACGT GCGTGGCACGCCGACCAACGTCATTCAACTGCTCGGTGAGCGCTTCGAGCCTACCGATTTCGTCTCGCCTGCGCGGTTTGCCAACCGCCTGTACTACAAG ATGTTCGGCGGCACCCACCTGGTCAATCGCGCCGGATTGGCGCGCACCTTCCAGAACATCCGCCTGTTCCGCGAAATGTCGGTGGTGGAAAACCTGCTGG TGGCGCAGCACATGTGGGTCAACCGCAACCTGCTGGCCGGCGTGCTCAATACCCCGGGTTACCGCAAGGCCGAAAGCGACGCGCTCGACCATGCCTTCTA CTGGCTGGAGGTGGTCGATCTGGTCGATTGCGCCAATCGCCTGGCCGGCGAGCTGTCGTATGGCCAGCAGCGGCGCCTGGAGATTGCCCGGGCCATGTGT ACCCGACCCAAGATCATCTGCCTGGACGAACCGGCTGCCGGTCTCAACCCGCAGGAAACCGAAGCGCTGAGCCGGATGATCCGTGTGCTGCGCGACCAGC ACGACCTGACCGTGGTGCTGATCGAGCACGACATGGGCATGGTCATGAGCATCTCCGACCACATCGTGGTGCTCGACCACGGCAATGTCATCGCCGAAGG CACCCCCCAGGAGATTCGCAACAACCCGACCGTGATCGCCGCCTACCTGGGTGCCGAAGAAGAGGAAATCGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCAGCCATTCTCGAACTGCGTGACCTGAACGTCTTCTACGGCCCGATCCAGGCGCTCAAGGGCGTGTCGATGCACATCGACGAGGGCGAGACGGTGAG CCTGATCGGCGCCAACGGCGCGGGCAAGTCGACCTTGCTGATGTCGATTTTCGGCCAGCCGCGGGCGGCCTCGGGGCAGATTCTCTATCGCGGCACCGAC ATCACCCGCAAGAGCTCGCACTACATCGCCTCCAACGGCATTGCTCAATCGCCTGAGGGGCGCAGGGTGTTCCCGGATATGACCGTGGAAGAGAACCTGA TGATGGGCACCATCCCCATCGGCGACAAACATGCCGATCAGGACATGCAGCGCATGTACGAGCTGTTCCCACGGCTCAAGGAACGTCGTTCGCAGCGGGC CATGACCATGTCCGGGGGCGAGCAGCAGATGCTGGCCATCGCTCGCGCCCTGATGAGTCGGCCCAAGCTGCTGCTGCTCGATGAGCCGTCGCTGGGGCTG
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| Amino Acid Sequence |
>ABC transporter
MNDEIVLSVEHLMMQFGGIKALSDVNLQVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIELNVRGTPTNVIQLLGERFEPTDFVSPARFANRLYYK MFGGTHLVNRAGLARTFQNIRLFREMSVVENLLVAQHMWVNRNLLAGVLNTPGYRKAESDALDHAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMC TRPKIICLDEPAAGLNPQETEALSRMIRVLRDQHDLTVVLIEHDMGMVMSISDHIVVLDHGNVIAEGTPQEIRNNPTVIAAYLGAEEEEIV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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