Pseudomonas cremoricolorata ND07, LK03_RS02005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata strain ND07, complete genome. [Details]
DNA Sequence Upstream of Gene
CCTGATCTGGATGGCGATCATGATGTTCCAGATCAACAAGCACGGCATCACGCCGACCGCCAAGACCCGCATGAGCTGCCTGAGCCTGTTCTGGCACTTC CTCGACGTGGTCTGGATCTGCGTATTCACCGTCGTTTATCTGCTGGGGGTTCTGTAATGGCCAATGCACACGACACGCATCACGACGACAGCCACGGTAG CGTGAAGTCGTACATGATCGGCTTCGTACTGTCGATCATCCTGACCGCGATCCCGTTCGCCCTGGCCATGTCGCCCATGCTGCCGAAGAACCTCACGGTT CTGGTGATCGTCGCCATGGCAGTGATCCAGGTAGTGGTACACCTGGTGTACTTCCTGCACATGGACCGCTCCAAGCAGCAACGCAACAACGTTTCGACGT TCCTCTTCACCGTCATGGTGATTGCACTGTTGGTCGGCCTGTCGCTGTGGATCATGTTCAGCATCCACATCGAAATGATGGCCAAGTGAGGTAAGTCTGC
DNA Sequence for Gene
>LK03_RS02005
ATGTCCGTGAAGCACTTCATCCAGATCACCAAGCCGGGCATCATCTTCGGCAACGTGATTTCCGTGGCAGGTGGTTTCTTCCTGGCTGCCAAGGGCCACG TGGACTTCGCACTGCTGCTGGCGGTGATCGTCGGCACGTCCCTGGTGGTCGCTTCCGGCTGTGCATTCAACAACTGCATCGACCGTGACATCGATCAGAA AATGGAGCGCACGAAGAATCGCGCCATGGTTCAGGGCGCCATGTCCCTGCCCGTGGCGCTGCTCTACGCCACCCTGCTCGGGGTGGCCGGCTTCAGCCTG CTGTACGTCCAGGCCAACCCGCTGGCGGCGTACTGCGCACTGATCGGTTTCGTGGTGTATGTGGGCTTCTACAGCCTCTGGCTCAAGCGTAAGTCGGTGC ACGGCACCTTGGTCGGCAGCCTGTCCGGTGCCATGCCTCCGGTGATCGGCTACTGCGCCGTGAGCAACAGCTTCGACCTGGCAGCCTTCACGCTGCTGGT GATGTTCAGCCTGTGGCAGATGCCGCACAGCTTCGCCATCGCCATCTTCCGCTTCAAGGACTACAGCGCGGCCAACATCCCGGTTCTGCCGGTGGCGCGC GGTGTTCTGGCAGCGAAGAAGCAGATCGTGCTGTACGTGCTGGCGTTCGTGCTGGCCACCTTGATGCTGACCCTGGGCGGTTACGCCGGCCTGGGTTACC TGGTGGTCGCCGCGGCCATGGGCCTGTACTGGTTGTACATGGCCTGGGGCGGCTACAAGGCCGAGGACGACAGCAAGTGGGCGCGCAAGGTCTTTGGTTT CTCCATCCTCACCGTCACGGCCCTGAGCCTGATGATGTCGGTGGACAGCCAGACCGCCGCCGACGTGCTGATGACCTACGCACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGCCCGGCAGTTGCTGCACTGAAAACCCCGACGCTTGCGTCGGGGTTTTTTATTGGGCGGCGCAAAGCCTATGCGCCATATTTCATGCAAAGCATCTGA AAATCATCCGCTAAACAGGAAATATTCGTTTACAAGAGTCGGTTTACGGCAGTATGTTTCGTCATGGCCGCCGCAGTGGCCAGCGTCGCTCGGACGGTTC CGGGCGCTTACGTACTTCGAGGAAACACCCCATGGCCGACTCCGTCACGCCACGCCGCTTTTCGCGCATCGATCGCCTCCCGCCCTACGTGTTCAACATC ACCGCCGAACTGAAGATGGCCGCCCGCCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCTGACGGCGCCACGCCGCCGCACATCGTCGAGA AACTGGTGCAGGTCGCCCAGCGTGACGACACCCATGGCTACTCCACCTCCCGCGGTATCCCGCGTCTGCGCCGGGCCATCTCCAACTGGTACAAGCAGCG
Amino Acid Sequence
>protoheme IX farnesyltransferase
MSVKHFIQITKPGIIFGNVISVAGGFFLAAKGHVDFALLLAVIVGTSLVVASGCAFNNCIDRDIDQKMERTKNRAMVQGAMSLPVALLYATLLGVAGFSL LYVQANPLAAYCALIGFVVYVGFYSLWLKRKSVHGTLVGSLSGAMPPVIGYCAVSNSFDLAAFTLLVMFSLWQMPHSFAIAIFRFKDYSAANIPVLPVAR GVLAAKKQIVLYVLAFVLATLMLTLGGYAGLGYLVVAAAMGLYWLYMAWGGYKAEDDSKWARKVFGFSILTVTALSLMMSVDSQTAADVLMTYAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site