Pseudomonas cremoricolorata ND07, LK03_RS01460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTGGCTGGTGAAGAAGGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCGCAGGCGACACCCCGCTGCTCACCTGC GACGTCTGGGAACACGCCTACTACATCGACTACCGCAACGTGCGTCCGAAATACGTCGAGGCGTTCTGGAACGTGGTCAACTGGGACTTCGTTGCCCAGC AGTTCGAAGGCACCCCGTTCAAGGCCTGATCATCTCAGCCGCCTTGCACATGAAACCCGGCCAGCGCCGGGTTTTTTTTCGCCCATGGCCGGAGACCGGC AAGTTGCCGACTGACGGGACGCCACTACGCTATAAGCGTCGAGCGACAGTGAAGACGCATTCAAGTACCCCCGCCGCCCTACCGATACAGTGCGGTAGAT CGGCCAAGGATCACTGGAACGGGCATGGCATCTGGCCAATAGTGCATTGCCCAGGTTGCTGGCAGAATGCTGCCGGGCGTATGGATTAAGGAAACCCTCT
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| DNA Sequence for Gene |
>LK03_RS01460
TTGAAGCTGGAATTTCGGCACAGCCTGACGGTGAAGCTGCTGCGGGTGGTACTGCTCTCGGCACTGGCCGTGGGCGTCGTCCTGAGCTGCGCGCAGATCA TCTATGACGCCTACAAGACGCGCCAGGCGGTCAGCAGCGATGCCCAGCGAATCCTCGACATGTTCCGCGACCCTTCCACCCAGGCGGTCTATAGCCTGGA CCGGGAAATGGGCATGCAGGTGATGGAGGGGCTGTTCCAGGACCAGTCGGTGCGCATGGCCTCCATTGGCCATCCCAACGAAACCCTGCTGGCGGAAAAG AACCGCCCCTTGCAGGACATGTCGATGCGCTGGCTGACCGACCTGATTCTCGACCAGGAACGCACCTTTTCCACGCCCCTGGTCGGCCGCGGCCCGTACA GCGAATACTACGGCGACCTCAACATCACCCTCGACACCGCCTCTTATGGCGAAACCTTTCTGGTCAATGCGGTGATCATCTTCATCGCCGGCGTGCTGCG CGCCCTGGCCATGGGCCTGGTGCTGTACCTGGTCTACCACTGGCTGCTGACCAAGCCGCTGTCGCGCATCATCGAGCACCTCACCCAGATCAACCCCGAC CGCCCCAGCCAGCATCAGATTCCACAACTCAAGGGCCATGAAAAGAATGAACTGGGGATCTGGGTCAACACCGCAAACCAGTTGCTGGCCTCCATCGAAC GCAACACCCACCTGCGCCATGAGGCGGAAAACAGCCTGCAACGCATGGCCCAGTACGATTTCCTCACCGGCCTGCCCAATCGCCAGCAGCTGCAAGCGCA ACTGGACAAGATCCTGATCGATGGCGGCCGCCTGCAACACCGCGTGGCGGTGCTGTGCGTCGGCCTGGATGACTTCAAGGGCATCAACGAACAGTTCAGC TACCAGGTCGGCGACCAGTTGCTGCTGGCCCTGGCCGATCGCCTGCGCGCCCACAGCGGTCGGCTCGGCGCCCTGGCACGGCTGGGTGGCGATCAGTTCG CCTTGGTCCAGGCCAACATCGAGCAACCCTATGAAGCCGCAGAACTGGCGCAGAGCATCCTCGACGATCTCGAACAACCCTTCGACCTCGACCACCAACT GATTCGCCTGCGCGCAACGGTGGGTATCACACTGTTTCCGGAAGATGGCGACAGCACCGAGAAGCTGCTGCAGAAGGCCGAGCAGACCATGACCCTGGCC AAGACCCGTTCGCGCAACCGCTATCAGTTCTACATCGCCAGCGTCGACAGCGAGATGCGCAGGCGCCGCGAGATGGAAAAAGACCTGCGCGAAGCCCTGC CGCGCAACCAGCTGTTTCTGGTCTATCAGCCGCAGATCAGCTACCTGGACCAGCAGGTGGTGGGCGTCGAAGCCCTGCTGCGCTGGCAGCATCCCGAGCT GGGCCTGGTGCCACCGGACCAGTTCATTCCCCTGGCCGAACAGAACGGCAGCATCATCGCCATCGGCGAGTGGGTGCTCGATCAGGCCTGCAAGCAACTG CGCGAATGGCACGACCAGGGCTTCAGCCAACTGCGCATGGCGGTCAACCTTTCTACGGTGCAGTTGCACCACAACGAGTTGCCGAGGGTGGTCTACAACC TGTTGCAGATCTACCGGCTACCGCCGCGCAGCCTGGAACTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCAGCACCGCCGCCCAGCACCTGCTCAG CTTGCGCAGGTCGGGGGCGATGATCGCCATCGATGATTTCGGCACCGGCTATTCGTCGCTCAGTTATCTCAAGTCGCTGCCGCTGGACAAGATCAAGATC GACAAGAGCTTCGTCCAGGACCTGCTCGACGATGACGACGATGCCACCATCGTTCGCGCCATTATCCAACTGGGCAAGAGCCTGGGCATGCAGGTCATCG CCGAAGGCGTCGAGAGCGCCGAGCAGGAGGCCTACATCATCGCCCAGGGCTGCCATGAGGGGCAGGGTTACCACTACAGCAAACCGCTGCCCGCCCGCGA GCTGACCGCATTCCTGCGCCAGGCACAGCGCAACAGCGAAGCGTTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCACGGTGCCATTACCAGCAATTACATGACGGCCCTTTACAGAGAATGCAAATCTTTCGCATGATGTTGCGTTTTCGCGTGCTCCGGCACACCAGTCC AACCCACGACGCAGGAAACCAATAATGATTCGTATGCCTCTGGCCTCCGCCAGTCTGTTGGCCATTGCCATTGCCTTGGCCGGTTGCGGTGAAAGCAAGG ACGACAAGGCCGCCGCACCTCAAGCCCAAGCCCCTGCTGCTGCCAGCACGAACGCTACCGCCCCTGGCGCGGTCGACGAAGCGGCCGCCAAGGCGGTGGT CAAGCACTACGCGGACATGGTCCATGCCGTCTACAGCGACTCGCTGAGCACCGCGAAAACCCTGCAGGGCGCCATCGACGCCTTCCTCGCCTCGCCCAAC GACCAAACCCTGAAGGCCGCCCGTGACGCCTGGGTCGCCTCGCGCGTTCCCTACCTGCAGAGCGAAGCGTTCCGCTTCGGCAACACCATCATCGACGACT
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| Amino Acid Sequence |
>diguanylate cyclase
MKLEFRHSLTVKLLRVVLLSALAVGVVLSCAQIIYDAYKTRQAVSSDAQRILDMFRDPSTQAVYSLDREMGMQVMEGLFQDQSVRMASIGHPNETLLAEK NRPLQDMSMRWLTDLILDQERTFSTPLVGRGPYSEYYGDLNITLDTASYGETFLVNAVIIFIAGVLRALAMGLVLYLVYHWLLTKPLSRIIEHLTQINPD RPSQHQIPQLKGHEKNELGIWVNTANQLLASIERNTHLRHEAENSLQRMAQYDFLTGLPNRQQLQAQLDKILIDGGRLQHRVAVLCVGLDDFKGINEQFS YQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDLEQPFDLDHQLIRLRATVGITLFPEDGDSTEKLLQKAEQTMTLA KTRSRNRYQFYIASVDSEMRRRREMEKDLREALPRNQLFLVYQPQISYLDQQVVGVEALLRWQHPELGLVPPDQFIPLAEQNGSIIAIGEWVLDQACKQL REWHDQGFSQLRMAVNLSTVQLHHNELPRVVYNLLQIYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGAMIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVESAEQEAYIIAQGCHEGQGYHYSKPLPARELTAFLRQAQRNSEALH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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