Pseudomonas cremoricolorata ND07, LK03_RS00605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGACAGCCTTGATGCGACAGGTCTGATCGAAGGTGTAGCGGTTGTCTTCGGTGACCTTGCTCAACACGCTGTAGGCACTACTGCCATCGGTGCCACGCA CCAGCGCTTCATAGGCGAACACCTGCTGACGCCCTGGCGCGACGATTGGCTGAAAGGCCATGCTGAAGTCGAACGGCAGTGGCGCCTGGTCGGCGCAGCG TCGGCAACCGACGGAGCGCGGGGCAGGTTGGGGTTCGGTAGAGCGGGTCATGACGGTTACCTCAGTGAGCGAATCGCGGCGTCGTGCCAGGCGGCGTGAG CCGGATATGCGGGTTCGACAACAGCATTGATGGCTTTACGCCAGACTGCCACGGCAGTCGTTGCTTGAGCGGCAGATCTTCGTCCCAGCGCAACCACTGT ACAGGGTAAAAAAGCCTTCAGCGCCGCTTGCACGGCGCCTTCGCCGTCACTAACGTAGCGCCTTTCCCTACCGCCCCCTCGCCCTGCAGGAGCCCTTGCC
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| DNA Sequence for Gene |
>LK03_RS00605
ATGGCCGCCGCCGCCTTCGCGTCCTTTCGCCCACGTCTTACCGCCGCTGCCACGCTGCTTGGCCTGCTCGGTCTGGGCGGCTGCCAGATGGGCGCGCAAC CTGAAAGCGTGCCGCCCAGCGTCGGTGTGCAGGCGCTCAAAGGCCTGGCGCACGGTGCGTCGGTGCGGCGCAACAGCATGGGCGCGCCGCTGATCGAAAG CGGCAACTTCCATGACGCGCTGTTCAGCCTGGGCTATGTGCACAGCGTCGACCGCATCGAGCAGATGCTCGCCATGCGCCTGCTCGCGCAGGGGCGCATG GCCGAGCTGGCCGGTGCCGAAGCGCTGGACGTCGACCGGCTGATGCGCGCGGTCAACCTCAGACAAAGCGCCGGCCAGCTGTATACCGCTGCCTCACCGC GGGTGCAGCGTTTCTTCGAGGTCTACGCCCGCGGTGTCAACGCCTACCTGTTCCGTTATCGCAACAGCCTGCCAGGCGGGCTGGCCAAGGGTAATCAGCA GCTCGAGTACTGGAAGCCTGAGGACTCGGCGCTGATCTTCAGCCTGTATGCCTTCAGCCAGTCGGTGAATCTGCAAGAGGAACTGTCCGCCCTGACCCTG GCCCGCCAGGTGGGCGGCGACAAGCTGCCCTGGCTGCTGCCGGTGGCCGCCGATGAGCCACTGGCCGAGGCCGAAGCCGGCAAACTCAAGGGCCTCAACC TGGTCGACCAGCTTGCGGGCTTCACCGCCCTGGCCGCCGCTGCGCAGAAGCTGGCCGATCTCGACCTGCTCGGCAGTCCGGGCTCGGCCAACCTGGCCAT CGCGCCGCAGCGCAGCCGCAGTGGCAAAAGCCTGTTGGCCAGCGACAGTCGCGCGGCCTGGGCACTGAGCCCGGTGCAGGTGCACACCAGCAAGTACCAG GTGGCGGGGCTGTCGCTGCCGGGTCTGCCGTTGCTGCTGGCCGGGTACAACGGCAAGCTGGCCTGGAGCAGCAGCGCGGTGATGGCCGACAACCAGGACC TGTTCCTCGAACAGGTGCGGCGCCAGGGCAATCAGCTGACCTACCTGGCCGACGGCAAGTGGCTACCGGCACGCGCGCGCAACGAAACCTTCTTCGTCAA GGGTGAGCGCCCTGTGCGCGAAGTGCTGTACGACACCCGCCATGGCACCTTACTCGGCCAGCCCGGCAACAATGGCCTGGCCCTGGCGCTGTACCTGCCG TCGCTCAAGGACGACCGCAGCCTCGATGCGCTGTTCGACCTGACCCGCGCAGGCTCGGTGGAAAAAGCCTTCGACAGCACCCGGGAGGTGGCCGCTGCGG CGCTCAACTTCGTCTTCGCCGAACCGCAGCACATCGCCTGGCAGGTCAGCGGCCGCTACCCCAACCGCCGTGAAGGCCAGGGCCTGCTGCCCTCACCGGG CTGGGACGGGCGCTACGACTGGGATGGCTATGCCGACCCGATGCTGCACCCCTACGATCAGGACCCAACCGCCGGCTGGATCGGCCATGCCAACCAGCGC AGTCAGCCCAAGGGCTACGGCATGCAGTTGTCGAGCACCTGGTACTACCCCGAGCGCGCCGAGCGCCTTGGCCAACTGGCCAGCAGCGGTCGCTTCGATG CGCGCAGCCTCAACCTGCTGTTCAACGACGCGGTGACGCCGCTGGCCGACAAGCTCAAACGCATGTTCGAAGCCCCAGGCATGGCCCAGCCGCTGCAACA GGCGATCAACGCCCTGCCCGCCGACCAGCGCAGCGCCGCGCGCGATGCCCTGGCGCGACTCAAGGCCTTCGATGGGCGCCTGAGCGCAGCCTCGGCCGAG GCTGCGCTGTACGAATTGTTCCTGCAAAGCGTGGCGCGGCAAACCTTCCTCGACGACCTCGGACCTGAGTCCGGCGCGCCCTGGCAAGCGTTCGTCAGCA ATTCGCGGCTGTCGTATTCGGCGCAGATCGACCACCTGCTGGGCCGCGACGACAGCCCGTTCTGGGATGACCGCAGTACGCCGCAGAAGGAAGACAAACC GACCATTCTCGCCCGCAGCCTGGCCGCTGCGATGCAGGCGGCCACTGCGCAACTGGGCAGCGACCGCCGCGCCTGGCAGTGGGGCGCGCTGCACCAGTAC CACTGGCCCGCGCCGACCTGGCACGGGCTGGGCGATCCGCTCGAGCGGCCCAGCATGCCGGCCTCCGGTGACTTCAGCACCCTGGCCTTCACCCCCTATG CCATCGGCAGCCAGTTCGACACCACCCTGCCGGCCTCGGCGCGCATGATCGTCGATTTCGGCCAGGTCGAGCCGCTGCAACTGATGACCAGCTCCGGGCA ATCGGGCAATCCCGCCAGCCCACACTTCGGTGACGCGACCGGCGCCTGGTTCAAGGGCCAGATGATGAGCCTGCCCCTGCAACCGCAGCACTTCGAACGC GCCTATGGCAAACAGCGCCTGTCGCTGGTACCCGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGACGATCCGGTCGAACTTCCAGGGCGGCGCGGCGCTCCCAACAGGAACTCCCTGCTCGGCGCCACCGCCATGGACCTTGTCATCGCTCGCCCCGAAG GCCTGTACTGCCCACCGGGGGATTTCTACATCGACCCCTGGCGTCCGGTAGCACGGGCAGTGATCACCCACGGCCACGGCGATCATTCGCGTCCGGGCAA CGGCCACTACCTGACGGCCGAACCCGGCGCGGGCGTGCTGCGCAGTCGCCTGGGCCAGGACATCAATCTGCAGACCTTGCCCTACGGCGAGCGGCTGGTG CACCACGGCGTCACCCTGAGCCTGCACCCCGCCGGACACGTGCTGGGCTCGGCACAGGTGCGCCTGGAATACCAGGGCGAAGTGTGGGTGGCGTCGGGCG ACTACAAGGTCGAACCCGATGGCACCTGTGCGCCGTTCGAACCGGTGCGTTGCCATACTTTCATCACCGAATCGACCTTTGGCCTGCCGATCTACCGCTG
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MAAAAFASFRPRLTAAATLLGLLGLGGCQMGAQPESVPPSVGVQALKGLAHGASVRRNSMGAPLIESGNFHDALFSLGYVHSVDRIEQMLAMRLLAQGRM AELAGAEALDVDRLMRAVNLRQSAGQLYTAASPRVQRFFEVYARGVNAYLFRYRNSLPGGLAKGNQQLEYWKPEDSALIFSLYAFSQSVNLQEELSALTL ARQVGGDKLPWLLPVAADEPLAEAEAGKLKGLNLVDQLAGFTALAAAAQKLADLDLLGSPGSANLAIAPQRSRSGKSLLASDSRAAWALSPVQVHTSKYQ VAGLSLPGLPLLLAGYNGKLAWSSSAVMADNQDLFLEQVRRQGNQLTYLADGKWLPARARNETFFVKGERPVREVLYDTRHGTLLGQPGNNGLALALYLP SLKDDRSLDALFDLTRAGSVEKAFDSTREVAAAALNFVFAEPQHIAWQVSGRYPNRREGQGLLPSPGWDGRYDWDGYADPMLHPYDQDPTAGWIGHANQR SQPKGYGMQLSSTWYYPERAERLGQLASSGRFDARSLNLLFNDAVTPLADKLKRMFEAPGMAQPLQQAINALPADQRSAARDALARLKAFDGRLSAASAE AALYELFLQSVARQTFLDDLGPESGAPWQAFVSNSRLSYSAQIDHLLGRDDSPFWDDRSTPQKEDKPTILARSLAAAMQAATAQLGSDRRAWQWGALHQY HWPAPTWHGLGDPLERPSMPASGDFSTLAFTPYAIGSQFDTTLPASARMIVDFGQVEPLQLMTSSGQSGNPASPHFGDATGAWFKGQMMSLPLQPQHFER AYGKQRLSLVPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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