Pseudomonas cichorii JBC1, BH81_RS21335

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022877 protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05569
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005351 carbohydrate:proton symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pci00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pci02060 Phosphotransferase system (PTS) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pci01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pci01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02378 Phosphotransferase system, EIIC IPR003352 Phosphotransferase system, EIIC 247 510 1.1E-18
PANTHER PTHR30505 FRUCTOSE-LIKE PERMEASE - - 118 575 0.0
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 125 208 2.9E-18
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 122 219 6.63E-35
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 5 90 3.3E-7
Gene3D G3DSA:3.40.50.2300 - - - 1 103 6.8E-20
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 2 103 8.02E-22
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 123 218 7.17826E-42
Gene3D G3DSA:3.40.50.2300 - - - 114 221 4.5E-39
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 3 97 1.64736E-23
FunFam G3DSA:3.40.50.2300:FF:000014 PTS system fructose-like transporter subunit IIB - - 117 223 1.2E-35
NCBIfam TIGR01427 JCVI: fructose-specific PTS transporter subunit EIIC IPR006327 Phosphotransferase system, fructose IIC component 228 566 0.0
NCBIfam TIGR00829 JCVI: fructose PTS transporter subunit IIB IPR003353 Phosphotransferase system, fructose-specific IIB subunit 124 207 2.6E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.