Pseudomonas cichorii JBC1, BH81_RS21185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
AGAACATCATGCACACTGGCGACGCCCTGCCCAAGGTTCAGCGCGGCACCCCGCTACGCGATGCACTGCTGGAAATGACCCGCAAGGGCCTGGGCATGAC CGCAATCGTCGACGCCGACGGCAAGCTGGCCGGGATCTTCACCGATGGCGACCTGCGCCGCACCCTGGATCGCCCGATCGACATTCGCGAAACCACTATA GATGAAGTCATGACCCTTCATGGCAAGACGGCCCGCGCAGAGATGCTCGCCGCCGAAGCCCTGAAAATCATGGAAGATCACAAGATCGGCGCGCTGATCG TCGTCGACGCCGATGACCGCCCGACCGGCGCCTTCAACCTGCAGGACCTGCTGCGAGCGGGTGTCATGTAATGGCGACTCTTCTGCTCTTTATGAATCAG GAACAAATCACCTGCCGGGGCAACGATCTGCCAGACTTGTCGCCTGCGCGCCAGGCAACATTGAAGCAGCCCGCCATGCGCCCTTATGGAAGCCTTTTCT
DNA Sequence for Gene
>BH81_RS21185
ATGTTCAGTAAGAAAATACGCACGATTCTGACTTTCGGGGTGCTGGCACTGCTGCTTGCTGCAGTCGGCTACTGGAACATCAGCCCGGAAAGCTTCATGG ATCAGCCTGTCGCCGCCACCGACGACACCGCCATCGACTATTACGCCATCAATGCCCATAGCGTGCAGTACCTGCCCGACGGCAAGATGCAATACGACAT GACTGCCGACAAGGTCGAACACGTCAAGGCAACGGACATCACCCTGCTGACCAAACCCGACCTGCACATGTACCGCGGCACCCTGTTCCCGTGGCACGTA CAGAGCGAGCGTGGCGAAGTTTCGCCGGGCGGCACCGAAGTTGAACTGATCGACTCCGTACGTGTTGCACGTACCGATGAAAAGCAGCGTACGACTATCA TTACCAGCAGTCGTATGACCGTATTCCCACAGAAGCAATATGCGCAGACCGAGCAAGTGGTTAGAATCGACGCCGCTGGCGGTGTAACGACAGCCAAGGG AATGAAAGCGTATTTGAACGACGGCAGGATGGACCTGCTGTCCAACGTAAGAGGACAGTATGAGTCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACTCTTCCTTTTTTGCTCGGCCTGGGCGCAGCACTGGGAAGCGCGAGCGCCTGGTCCCTGCCAACCGACCGCGATCAGCCGATTCACATCCAGTCTGAC GATGCGCAGCTCGATGACAAGAAAGGCGTTGCCACCTACAAGGGCAACGTGATCATCACTCAGGGTTCGATGAAGATCACCGGTAATACCGTGACCATCA CTCGTAACGCACAGGGCGAAGTCGACGTATTCACCTCCGTCGGCAACCTGGCCTATTACGAGCAGAAACCCTCGGTAGACAAGCCGATCGTGCAGGCCTA TGGCGTCACCATCCAGTATTACGCGGCACAGGATCGCATCGTACTGATCGACAAGGCCAAGGTCATCAACGATGGCAACACCTCCGAAGGCGAGAAGATC GTCTATGACACCGTGAAGCAGGTCGTCACCGCAGGCCGAGCCAATGGCGGCGCCAAAGTGACTGCACCGCGCCCACGGATCGACATGGTCATCCAGCCTA
Amino Acid Sequence
>LPS ABC transporter permease
MFSKKIRTILTFGVLALLLAAVGYWNISPESFMDQPVAATDDTAIDYYAINAHSVQYLPDGKMQYDMTADKVEHVKATDITLLTKPDLHMYRGTLFPWHV QSERGEVSPGGTEVELIDSVRVARTDEKQRTTIITSSRMTVFPQKQYAQTEQVVRIDAAGGVTTAKGMKAYLNDGRMDLLSNVRGQYESR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site