Pseudomonas cichorii JBC1, BH81_RS19085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCTAAACAAACGCTCGGAAAAGGTGGCCAATGAGCCATTGCCGGAAAAGCCGAGGCACTATATCCTGCGTTTCCAATTGTAAAAAACACTACATAAGGG ATTTACGCTTCGTTTGTCGCCCATTTTCGGTGCAGTGAAAATGAACGTGCAAACCTGAAAAAAAGCGCGAAATCACACAGCAAATTCAATGACGGATGAA CAAGCTGCGGAGAAAAATCTGTATACTCCCGCGCTTGCTCCAGGGCACTCAAATGACCATTTGCAAATGCAAAGCTGGCTCACCTGAAAGCAACCCCGAA AACCCGTATTGCTCGCGTGTGAGCCGACCTCACAAGCGCACTGAACGACCGACAATTTCATAGATCGGCGATCACTAAAGACTCCGAGTAAACCTCGAAC ATTCACTGCCAGCGTGCACCTGTCGCAACGCTGGCGATCCACACTTGAAAATCCAACCGCGGTTGCCGCAGGCACCCTCACGCACAGGAGCTTTACCACC
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| DNA Sequence for Gene |
>BH81_RS19085
ATGCTGAGCTGGGACGAATTCGACAAAGACGAAGGCGAAGTAGCCTCCAAACCCAACCAGGCTGCACAGGCTCACGAAGCCACGATGGATCGCCTGGACA GCGCCGGTGGCGCTGCCGCACTGGAAGCCCGCGCAATTACCGCCAGCGACTCTGCCGCCCTGATCCGCGCCAAGAAAGCACTGGATGCTCTGGACGTTGC CGAAGGTCTGGCTGAACTGGAAGGTGCTTCGGCCCGTGTCGCTGTCGATGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTGCCTTTC AAATATGACTGGGCCTGGCAGAAGTACCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAAACC CGGAAGGCCTGACCGACGACGAGCGCCGCATCGTGATGCGCAACCTGGGCTTCTTCTCCACCGCCGACTCGCTGGTTGCCAACAACCTCGTGCTGGCCGT GTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAGGAAGCGATCCACACCCACGCTTACCAGTACTGCATCGAATCG CTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATTCCATCGGTCGCCAAAAAGGCAGCCTGGGGCCTGAAATACACCCGCTCGATCTCCG ATCCGAAGTTCGAGACCGGCACCGTCGAAACCGACAAGGAACTGCTGCGTAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTATTGCGG CTTCACCCAGATCCTCTCCATGGGTCGCCGCAACAAGATGACCGGCGTTGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAACTTC GGTATCGACGTGATCAACCAGATCAAGATCGAAAACCCGCACCTGTGGGATGCCGAGATGAAGGAAGAAGCCACGCAGATGATCCTGCAAGGCACCCAGC TGGAAATCGAATATGCCCGCGACACCATGCCTCGCGGCGTACTGGGCATGAACGCTGCGATGATGGAGGACTACCTCAAATTCATCGCCAACCGTCGCCT GTCGCAGATCGGCCTGAAAGAAGAATACCCGGGCACCAACAACCCGTTCCCATGGATGAGCGAAATCATGGACTTGAAGAAAGAGAAAAACTTCTTCGAG ACTCGGGTTATCGAGTATCAGACTGGCGGTGCGTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGGTTCTTCTTCTCCCCCCTCTTCGCGAATGAATTCGCTCCCACGGTGCACAGTGAATGTGTGTGGGAGCGAATTCATTCGCGAAAGCCCAGGAACATC CATCACCCGCGGATAAATCCGCACCCCTCCCTGAATTTGATGTATGCCTTACCTGGCTGATATCAGGGCAGCTCTCCTACCAGATAACTGCGATGCGTTT TACCGATGCGCTCAATAGACGCTTGAGCGACCCCGGCTTGCGCCGCATACAAAGGCCATTGCATTACGGCATCGTGTACCTGCCGGATGACCTTACTAGC ATCCATACCTCGAACCAGCCTTGCGACTGACAAAAGATCGTCGAGGGTGAAGGCATCGCGCTTCCCGTTAATGGTCATTTGGTGGGTTTCAACCCATTCG CTACCTGGCAGGTAAGACCATGAAACGTCATATGCAGGCGTCAGGTACCAGGTCCCGTCCGTATCCATCATGAAAGCGATGTTTTTTGTGTGATCATCCT
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKDEGEVASKPNQAAQAHEATMDRLDSAGGAAALEARAITASDSAALIRAKKALDALDVAEGLAELEGASARVAVDEKRMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTNNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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