Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGATACTCATCATTCCCGCCTCCCTGCCGACAACCTCATCGATATTTCGAATAGAAACGGCTCTATCAAGGGAGTTCAGATGCGTCCAGGTGTGTTGTGT CTGTTGATGATGGTGTTAGCGGTAAACAGTGCGGTTCAGGCCGAGGAAACCAATGATTCCGGTAACGTGCAGGCATTGCATTTGCCCAGCCCTGCCAGCC GGATTGCCGAGCTTGAACAGCGACTCAGGGAAAGCGAGCGCCTGCGCGAAGAACAGCTCAGGCTGGCGCAGAATGCCGAGGCCGAGCGTGAAAGCGCGCA ACTCGCACGTTTGCGTCAAGAGAACCAGAGACTCAAGCTGCAGCTCAAGGAAGCACAATCCATTGCGTCCTCACGCTTGCTGACCGAACAGCAGCAATGG TTCATTGCAGGCGGTGGCGTTGCGGTAATAGCCCTGGTGTGCGGTATATTTGTCGGCGGTCGACGTAAGCAACGTCAGCAATGGCTAAATTGAGTGAGTC
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DNA Sequence for Gene |
>BH81_RS18300
ATGAGCGAGCTGTTACTAATTGATGATGATCAGGAGCTGTGTGAGCTTCTGAGCAGTTGGCTGAGCCAGGAAGGTTTTCAGGTCCGCGCCTGTCACGACG GCCACAGTGCGCGTCGGGCACTGGCGGAAACCGCTCCGTCTGCCGTGGTGCTGGACGTGATGCTGCCCGATGGCAGCGGCCTTGAACTGCTCAAGCAACT GCGCACCGACCATCCCGAGCTTCCCGTGGTCATGCTCTCGGCCCGGGGCGAGCCTCTGGACCGCATCCTCGGCCTCGAACTGGGTGCCGACGACTATCTG GCCAAACCCTGCGACCCGCGGGAACTGACGGCCAGGCTGCGCGCCGTACTGCGCCGCAGCCATCCGGTCGCCACACCCAGCCAGCTTGAACTGGGCGACC TGTGCTTCAGCCCGGTGCGCGGCGTGGTGAGCATCGATGAAAAAGAACTGACCCTGACCATTTCCGAAAGCCGCCTGCTCGAAGCGCTGCTGCGTCAACC GGGCGAACCTCTGGACAAGCAGGAGCTGGCGCAACTGGCCCTGGGGCGCAAACTGACGTTGTATGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGCCCGCATGCCGATGGCCGGCCCCGTATCGTGGCGCTGCGTAGCCGCGGTTATTACTACAGCCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCAAAAGCCCCGGCGCTTGGTAAACCCGGGTGCCGGTTCGCTTTACACAAGCTTTACCGAGGGCTGACCGCCCTTGACCTTGATCTCCCTAAACTGGGC TCCAACGGCAACGAGCCGCACCAGAGACAAGGAGATTCACCATGCGCAAGACCCTGATCGCTTTGATGTTCGCAGCAGCACTGCCTACCGTCGCCATGGC CGTACCACCACCTGGCGGCCCGGAAGCCGACGCTCCGGGCATGCATCAGGATCGCGATCATCGCGGCCCTGGCCTGGAAATGAAACGTGGCCCCGGCCCT TTTGCAGACCTGGATCTGACTCGCGAACAACGCCGTGACATCGGTAAATTGATGGGCGAGCAGATGAAAGAGCGCCGCGACGTCACCGAGCGCTACCTGG CCAAACTGTCCCCGGCAGACCAGAAAGCCATGAAAGACGAACTGGACGCCAAACGGGCCAAGACCGACAGCGAGATCCGCGCCCTGCTCAAGCCGGATCA
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLSSWLSQEGFQVRACHDGHSARRALAETAPSAVVLDVMLPDGSGLELLKQLRTDHPELPVVMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPVATPSQLELGDLCFSPVRGVVSIDEKELTLTISESRLLEALLRQPGEPLDKQELAQLALGRKLTLYDRSLDMHVSNLR KKIGPHADGRPRIVALRSRGYYYSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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