Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACCGGCATGGCGCTGTTTCTGACCATGTTCATCATGGCGCCGGTGTTCGATCGGGTGAATCAGGATGCCTTGCAGCCTTATCTGGCGGAAAAACTCAGC GCACAGGATGCGGTGGCCAAGGCTCAGGTGCCGATCAAGGACTTCATGCTGGCCCAGACCCGCACCAGCGACCTGGACCTGTTCATGCGCCTGTCCAAAC GTACCGATATTCAGACGCCTGACGCTGCACCCTTGACCATTCTGGTTCCGGCCTTCGTGATCTCCGAACTCAAGACGGCATTCCAGATCGGTTTCATGAT CTTCATCCCGTTCCTGATCATCGACCTGGTGGTCGCCAGTGTGCTGATGGCCATGGGTATGATGATGCTGTCACCGCTGATCATTTCCTTGCCGTTCAAG ATCATGTTGTTCGTGCTGGTGGATGGCTGGGCGTTGATTGTCGGAACCCTGGCGGGAAGTTTTGGTGGTGTATGAGTCGTTTTGACGAGGAGTCTGCCCG
|
|
DNA Sequence for Gene |
>BH81_RS16540
ATGACGCCGGAAGTAGCGGTCGACCTGTTTCGTGAAGCGTTATGGCTGACCACCGTGCTGGTGGCGATTCTCGTGGTGCCGAGCCTGATCTGCGGCCTGC TGGTCGCCATGTTTCAGGCGGCTACCCAGATCAACGAACAGACCCTGAGTTTTCTTCCGCGTCTGATCGTGATGCTCCTGACCCTGATTGTCGTGGGTCC CTGGCTGCTGAAAATATTCATGGAATACATCCTGTCGCTGTACGGCAGTATTCCGACCTTGATCGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGCTCATGCAGCCTTTGCTTGCGCTGACCGATACCCAGATCAGTACCTGGGTCGCCAGCTTCATGTTGCCATTGTTCCGGATCGTCGCTGTCCTGATGA CCATGCCGATCATTGGTACGACGCTGGTGCCGCGTCGCGTGCGCCTGTATTTTGCCGTGGCGGTCACAGTGGTGGTTGCTCCTGTGCTGCCCGCCATGCC GCCTGTCGAAGCCCTTGATCTCAGTGCGCTGCTGTTGATCGGTGAGCAAATCCTCATCGGTGCGGGCATGGGGCTTTCGCTGCAGTTGTTCTTCCATATT TTCGTGGTGGCGGGTCAGATCATTGCCACCCAGATGGGTATGGGCTTTGCCTCGATGGTCGACCCCACCAACGGCGTGTCGTCGGCGGTTATCGGTCAGT TTTTCACCATGCTGGTCACGCTGCTGTTTCTGGCAATGAATGGCCATCTGGTGGTGCTGGAAATTCTGGTCGAGAGCTTCACCACCATGCCGGTAGGCAG
|
|
Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFREALWLTTVLVAILVVPSLICGLLVAMFQAATQINEQTLSFLPRLIVMLLTLIVVGPWLLKIFMEYILSLYGSIPTLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|