Pseudomonas cichorii JBC1, BH81_RS16270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pci02020 | Two-component system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pci01501 | beta-Lactam resistance | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR46825 | D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH | - | - | 31 | 377 | 1.8E-41 |
| SUPERFAMILY | SSF56601 | beta-lactamase/transpeptidase-like | IPR012338 | Beta-lactamase/transpeptidase-like | 28 | 381 | 6.82E-87 |
| Gene3D | G3DSA:3.40.710.10 | - | IPR012338 | Beta-lactamase/transpeptidase-like | 18 | 384 | 0.0 |
| Pfam | PF00144 | Beta-lactamase | IPR001466 | Beta-lactamase-related | 35 | 379 | 4.2E-65 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.