Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AAGCCGATTCCCATGTGGCAATCCCCAATGACGAGCGCAGCCTGGACGAGATTCGCAGCAAGGATCTCGTGCCTTTTGCACGTCTGAGTAAACAACTGGC GGCGGTGATGCCTGCCCATGTCATCTATCCGCAGGTCGATTCGCAGCCTGCCGGGTTCTCCCGTCGCTGGTTGCAGGAGATCCTGCGCGGCGAACTGCAA TTTGACGGTGTCATCTTCAGTGATGACCTGTCCATGGCAGGTGCTCATGTGGTGGGCGATGCGGCCAGTCGCATCGAGGCTGCGCTGACGGCCGGTTGTG ACATGGGCCTGGTCTGCAATGACCGTGCTGCCGCCGAGCTGGCCCTGAGCGCTGCGCAACGTCTGAAGGTCAAGCCTTCTGCGCGTACCGCCCGCATGCG TGGCCAGGCTCATGCTTCGACGGATTATCGCCAGCATCCGCGCTGGCTGACGGCGCTTCAGGCGCTGCGCAATGCCCAATTGATCGATTAAGGATTTGCA
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DNA Sequence for Gene |
>BH81_RS15775
ATGACGGTTTACGCGATTATCGGCGGAACAGGCCTGACCCAGCTTGAAGGTCTGAACATTCGCCAGTCCCTGCCCATGAACACGCCTTATGGCGCGCCGT CGGGCGAAATTCAGATCGGTGACTATGCCGGTCGCGAAGTGATGTTCCTGGCCCGTCACGGCCATCCTCATCGCCTGCCGCCGCATCAGGTCAACTACCG CGCCAACATCTGGGCCTTGAAGCAGGCCGGTGCGCAAGCGATTCTGGCCGTGAATGCCGTGGGCGGTATTCATCCGGCCATGGGAACCGGCCATTTCTGC GTGCCCCATGATCTGGTGGATTACACCAGCGGTCGCCAGCACACCTTCTTTGCCGACGATCTGGAGCAGGTCACCCATATCGATTTCAGCTACCCCTACA GCGAGGCGCTGCGCGATCGTCTGATTGCGGCACTGGCGGCTGAAGGGTGCGAGTTCAGTGATCGTGGCGTGTATGCCTGCACCCAGGGGCCGCGTCTGGA GACGGTGGCCGAGATCGTTCGTCTTGAGCGTGATGGCTGCGACATCGTCGGCATGACCGGTATGCCTGAAGCGGCACTGGCCCGTGAGCTGGAGCTGGAT TACGCCTGTCTGGCGCTGGTGGTCAATCCGGCTGCGGGCAAGTCGAAGGCTGTTATCACCATGGCCGAGATCGAGCAGGCGCTGCGTGATGGCATGGGTA AAGTGAAATCCACTCTGGCGCGGGTGCTTTCGGCAGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AACCCACCCCGTGTGAGCGGATTTATTCGCGAAGAGGCTTCTCGCGAATGAATTCGCTCCCACAGGGGGCGGATTATTTCCTGCCTTTCTTCGGCGCAGC CGGCAATGGCGCGAACAGCGCCTTCAGGTCTTCGTCCCGTAGCTTCCAGTCTCCTGCCGAGCGGCCATCCAGGACGCCTGCTGCCAGGGCCGATTTTTCC TGCTGCAAGCGCTGGATTTTTTCTTCCACGGTGCCGCGGGCAATCATCTTGTAGACGAACACTGGCTTGTCCTGACCGATGCGGTAGGCGCGGTCGGTGG CCTGGTTTTCTGCGGCCGGGTTCCACCATGGGTCATAGTGAATCACGGTGTCGGCAGCGGTCAGGTTCAGGCCGGTACCACCGGCTTTCAGGCTGATAAG GAATACCGGCAGCTTGCCGTTCTGGAAGTCGTGGATCGGTGTGCGGCGGTCACGGGTCGAGCCTGTGAGCAGGGCGTAGGGAATGCCGCGCTGTTCAAGC
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Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLPPHQVNYRANIWALKQAGAQAILAVNAVGGIHPAMGTGHFC VPHDLVDYTSGRQHTFFADDLEQVTHIDFSYPYSEALRDRLIAALAAEGCEFSDRGVYACTQGPRLETVAEIVRLERDGCDIVGMTGMPEAALARELELD YACLALVVNPAAGKSKAVITMAEIEQALRDGMGKVKSTLARVLSAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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