Pseudomonas cichorii JBC1, BH81_RS15470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCCGTTCCAGATTTCCGGCCAGCCGAACACCGTCAGTGCCGCACCCGACAAGCGTCCGCGAGCGGTCTTCACCAGATCGAATTGCCCGGAGCCGTCCTT GTCCGCTTCGTTGCGTTCGCTGCCGAACTTCAGGGGCACAGTGATGTGGCTGTCGAAGGAAATGATCCGTTCCTGCAGCTCTTCGGCCTGTTTCATCACC TTGACCGGGTAACCCGATGGCGACCAGTAATTCCAGGCCAGCCAGCCTGCACCGGCACTGATTGCCAGAGCCAGGGGCAGGCCAATGAAAAGAGCCTTTT TCCAACGCGGTTTTGTCATTGCCATCTCTATTCCGGTTCGCCGTTCAGAAGCAGGCACAAGGGCCTTTGCTATCTGGGGAGAACGAGCGGATGGCGGAAA AATTTAACGCGGATGCCGTTCGCGGTCCTTGCCCTAAATTTCTGCATCGATGTTACGTCCTAGCTGGGATAAACGCCGTTTTGGGGCAACAGGTAGTGCA
DNA Sequence for Gene
>BH81_RS15470
ATGACGATTTCTCGACGAGGGTTTATAGCGGGCCTGGCGCTCACCGGTGCTGCGGTACCGGCTGCTTATTACGCACACCGCGAACTCACGCGCGTCGAAG AGCCCGTTACACCGGGGGAAGCGACTGCCGCTGCGGCCGATACCGCTACCCAGCGGCTGGCCGACAAGCTGCGCGGGATATGGGATATACGTTTCGAGGG GCGTGATGCAGGATTGGCCGGAGCGCCGCTCAAGGGCCTGGAAATGTTCCTGGACATTGCCCCGCGTGGCCGTGGCCTGCGGGGTTATATCGACACCGCT GAGCGTCTGCGTGGCGATGCTGAACCGCGCTTTCGGGTGATCGGCGACCTGCGTTCTGCCGATGCCTCGACGCTGTATTTTCGGGTCATTGACGGCCATC TCGATGACAGCCCGCAAAGCGATGCGCCGGACTATGAATTCAGCATGGTTCTGGATGAAGTCTGGGGCAGCTTCGGTAATGCGGGCAGCGGCACTTTGAG TGGGCGCATCGAGCGTCTGGATCGTCCGCTGGCGTTGCCTGAGCTGGAAAATCGTTTTATTGCCACCAAGCAGGTGTTTCCCGAAGCCCGTGACCGTATC GGGCTGACGCCTCCGTTTCTGGCCTGGCTGGTTTCAAAGGAGCATCGCCTGTTTCACCAGCTCTGGCATGCCAGCCGCGATAAGTGGCATCGCCTGCCCG AAGAAAAACGCAATGCCCTGCGCGGTATCGGCTGGCAGCCAGGCCCGAGAGACAAGGAGCGCGATGCCCGTGGCGAGCGCAAGGACCGTAATGGCTCGGG CATCGACTTTTTCTATATGCATCGGCACATGCTGATCCAGGCCCGGCAGTTTCAGGAGCTGCCTTCCTGGCCGCGCTTCCCTTTGCCGCAGCCGGAGCTT GAGCGGGACCGTCAGGGCTTTGCCCGATACTTCGATAATCACGATGGCTGCGCGTTGCCACCGCCCTGGCAGGCCAATGGTGATGCGGAATATAGCCAGT TGGTCAGCGATATCAAAAGCGACGAGACATTCAGCACGCATTTTCAGGCGTGGGAATCCCAATACAGGGACCCGCGCTTTCTGTCGAAACTGACCCTTGG CCAGTTTGGTTCCCAGGTTGAACTGGAACTGCATGACTGGTTGCACATGCGCTGGGCGTCCGTTGCGAGGGACCCTTCAAATGGCGAGCCGGTGCCCATG GCCCGTGATTCGGCGGATTTCGCGGCGCGCTGGTTCGAGCCGGAAAACGATTTTCTCGCTGACCCGTTTTCTTCCCATGTGCATCCGGTTTTCTGGATGT TCCATGGCTGGATCGATGACCGGATCGACGACTGGTTCCGTGCCCATGAGCGCTTTCATCCGGGAGAAGTGAGCCGTCTTGAGGTCAATGGCGTGCCATG GTTCGCGCCGGGGCGCTGGGTTGAAATCAGCGATCCCTGGCTCGGCCCGCAGACTCATGGATGCAGCACCGCACCGGGCCTGAATGCCGGGACCACCATG GAAATGGACCCGGAGGTCATGAAGCTGGCGCTGCGCATTACTTTTGCTGCCGATGACAAGCTCGGCAACCTCCTGCGCCGCGTGCCGCGTCGGCCCTGGT ATGCAAGAAATCTGCTGCCGGACAAGTGGTTTGGCGGGGGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGGTTTGAGTGTGACGCCGGTTTTCATGGGGGAGTGAGCTTGCTCGCGACGGTGCCGGAAATACACCGTCGTTCACACTGCCGTCGCGGCCAAGGCAT TCCTACAGCGGGTGTGACCAGCCGCCACCCAGGGCCTTGTACAGCGCAATACTCGCCTGCACCCTCGACAGCCGAAGCTGCACGCTCACATCCTGGGCCA GATACAGTGTGCGTTGGGTTTCCAGCACGGTCAGCAAATCCTCCGCGCCGGCCTCGTAACGGCTCTGGGCGATGCGGAATGCGGTCTGGGCCTGTTTGAG TTCTTCGTCGTGCCAGTGCCTTTGCTGGTCGAGGCCGCTGATGCTGTTCAGGGCTTTCTCCACGTCGGCGAAGCTGTTGATGATCGCGCCGCGATAGGTT TCCAGCAGTTCTTCCTGACGGGCCGTGGCCTTGTCGCGCTCTGCACTCAAGCGTCCGTTATTGAAAATCGGTCCGGTCAGGCCGGCAGCCAGACTGCTGA
Amino Acid Sequence
>PvdJ/PvdD/PvdP-like protein
MTISRRGFIAGLALTGAAVPAAYYAHRELTRVEEPVTPGEATAAAADTATQRLADKLRGIWDIRFEGRDAGLAGAPLKGLEMFLDIAPRGRGLRGYIDTA ERLRGDAEPRFRVIGDLRSADASTLYFRVIDGHLDDSPQSDAPDYEFSMVLDEVWGSFGNAGSGTLSGRIERLDRPLALPELENRFIATKQVFPEARDRI GLTPPFLAWLVSKEHRLFHQLWHASRDKWHRLPEEKRNALRGIGWQPGPRDKERDARGERKDRNGSGIDFFYMHRHMLIQARQFQELPSWPRFPLPQPEL ERDRQGFARYFDNHDGCALPPPWQANGDAEYSQLVSDIKSDETFSTHFQAWESQYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPSNGEPVPM ARDSADFAARWFEPENDFLADPFSSHVHPVFWMFHGWIDDRIDDWFRAHERFHPGEVSRLEVNGVPWFAPGRWVEISDPWLGPQTHGCSTAPGLNAGTTM EMDPEVMKLALRITFAADDKLGNLLRRVPRRPWYARNLLPDKWFGGG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site