Pseudomonas cichorii JBC1, BH81_RS15435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCTATGCCGATCGCATGACCGGTTCCATGGAGCGGGCCATTGGCGAGACCGAGCGGCGTCGTGAGAAACAGATCGCCCATAACCTGGCCAATGGCATCA CGCCAAAGGGCGTCATCAAGGACGTGGCGGACATCATGGAAGGCGCGACGGTCCCTGGCTCGCGCAGCAAGAAGCGCAAAGGCATGGCCAAGGCCGCCGA AGAAAACGCACGCTACGAGAACGAACTGCGCTCACCCAGCGAAATCACCAAGCGCATTCGTCAACTGGAAGAGAAAATGTACCAGTTGGCCCGCGATCTG GAGTTCGAGGCCGCGGCGCAGATGCGCGACGAGATCGCCAAATTGCGTGAGCGGTTACTGGCGGTTTGATTCATCGATTTTTTCGCGAATGAATTCGCTC CTGCACGGGTTGAAGGAGCGAATTCATTCGCGAAGCATGGAGCCAAAAGGGTTCGGCCTGTTAAGATTCCGCGCTTGATCGATCTATTTCGGAATTTTTC
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| DNA Sequence for Gene |
>BH81_RS15435
ATGACCACCGTTCGCACTCGCATTGCGCCATCACCCACTGGCGATCCCCACGTTGGCACCGCCTACATCGCGCTTTTCAACTACTGCTTTGCCAAGCAGC ACGGTGGTGAGTTCATCCTGCGTATCGAAGATACCGATCAGTTGCGTTCGACCCGCGAGTCCGAGCAGCAGATTTTCGATGCATTGCGCTGGCTGGGCAT TGAGTGGAGCGAAGGTCCGGATGTGGGCGGCCCACATGGCCCGTATCGTCAGAGCGAGCGAGGCGACATCTATCGCAAGTACGCTCAGCAACTGGTCGAT CTCGGCCACGCCTTCCCGTGCTTCTGCACTGCCGAAGAGCTGGACGAGATGCGCGCCGAGCAGATGGCCAAGGGCGAGACGCCGCGCTATGACGGCCGCG CCTTGCTGCTCTCGAAGGAAGAAGTGCAGCGTCGCCTGGACGCCGGCGAGCCGCACGTCATCCGCATGAAAGTGCCGACCGAGGGCGTTTGCGTGGTGCC GGACATCCTGCGTGGCGAAGTGGAGATCCCGTGGGATCGCATGGACATGCAGGTCTTGATGAAGACTGACGGTCTGCCGACCTATTTTCTGGCCAACGTG GTGGATGACCACCTGATGGGGATCACCCACGTACTGCGTGGCGAAGAGTGGCTGCCGTCCGCGCCGAAACTGATTCTGCTCTACGAGTATTTCGGCTGGG ACAAGCCGCAGTTGTGCTACATGCCGCTGCTGCGTAACCCCGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACGTCGGTGACGTTCTACGAGCGCAT GGGCTTCATGCCTGAGGCCATGCTCAACTACCTGGGTCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCCCTGCAGGAAATGGTCGATAAC TTCGACCTGTCCCGCGTCTCCCTGGGCGGTCCGATCTTCGATATCGAGAAACTGTCCTGGCTCAATGGTCAGTGGCTGCGCGAGTTGCCGGTCGAAGAGT TTGCCAGCCGGGTGCAGAACTGGGCGCTGAACCCCGAATACTTGATGAAGATCGCGCCGCATGTTCAGGGCCGTGTCGAAACCTTCAGCCAGATCGCGCC ATTGGCCAGCTTCTTCTTCGCGGGCGGCGTGACGCCGGATGCGAAGCTGTTCGAGCACAAGAAGCTGTCGGGCGATCAGGTCCGCCAGTTGATGCAGTTG ATCTTGTGGAAGCTCGAATCCCTGCGTCAGTGGGAGAAAGACCCGATTACTGCCTGTATCCAGGCGGTGGTCGATCATCTGGAGCTGAAACTGCGCGATG CCATGCCGCTGATGTTCGCCGCCATTACCGGTCAGGCCAGTTCGGTTTCGGTGCTCGATGCAATGGAAATCCTCGGGCCGGACCTCACCCGTTTCCGCCT GCGGCAGGCTATCGATCTGCTCGGCGGAGTTTCCAAGAAAGAAAACAAAGAGTGGGAAAAGCTGCTGGGTGCCATAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCAGTGAAGGATCACTGTGTGCTCGCAGGGCAGGGGTGCACAGTGATCGATTCGACCTCGGTTTTACGGGGGCGAAGCGTTAAGTGTTTGTTATGTCGA CGAAAAATTTTCAAAAATGTTGAAAATAAATTTGACAGGTTAGCGACTCACGCTTAACATGCGCCCCGTCCACTGATGTGGGGCTATAGCTCAGCTGGGA GAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAAACAAAGCGTTTCAAGGTCGGCTACATTGCCTTGAAACAGTACGA TGACAGGAACCAGCGCCTGTCATGTACGAAAGAAGGTTTTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGT CCCCTAGGGGACGCCATATTCAAAGAGTGATTCCGCAAGGTTGATCTCCGCCGCGAGGCGATAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCA
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWSEGPDVGGPHGPYRQSERGDIYRKYAQQLVD LGHAFPCFCTAEELDEMRAEQMAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPTEGVCVVPDILRGEVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDIEKLSWLNGQWLRELPVEEFASRVQNWALNPEYLMKIAPHVQGRVETFSQIAPLASFFFAGGVTPDAKLFEHKKLSGDQVRQLMQL ILWKLESLRQWEKDPITACIQAVVDHLELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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