Pseudomonas cichorii JBC1, BH81_RS11510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCAGATGAACTTCGTCGACAACCAGGTCAACCCGCGGACCGGCACCATTCGCGGTCGCGCCGTGTTCGACAACACCGACGGCAGCTTCACTCCCGGCCT GTACGCACGCCTCAAGCTGGTGGGCAGCGGCACCTATTCGGCCATGCTGATCAACGACGAAGCCGTGGGCACGGATCTGGGCAAGAAATTCGTACTGGTG ATGGACAAGGACAACAAGCCGACCTATCGCTTCGTCGAGCTGGGCCCCAAGGTTGAAGGTCTGCGCATCGTGCGCAGCGGCCTGGGCAAAGACGACACCA TCATCGTCAAAGGCTTGCAGCGCGTTCGCCCTGGCCAGCCTGTAGACCCTGAAGTGACGCCAATGGCTTCCAGCGAAACACTGGCTGCACTGCTCAAACA ACGCCAGGCCCTAGAAGCCAGCAATCTGTCACAAGTGGCGCCCAAGGCGGCCGTCAAAATCGCCAGCGCAACTGCGCCTCGCGGCTAAGGGACTCGTCCG
DNA Sequence for Gene
>BH81_RS11510
ATGAACTTCTCCAAATTCTTTATCACGCGGCCGATCTTCGCGGCAGTGCTGTCACTGCTGATCCTGATCGCCGGTGCCATCTCGCTGTTCCAGTTGCCGA TCAGCGAATACCCGGAAGTGGTTCCGCCCACAGTCGTGGTACGTGCCAGCTTCCCCGGCGCCAACCCTAAGGTCATCGGTGAAACCGTTGCTTCGCCACT GGAACAGGCCATCACCGGCGTCGAGAACATGCTGTACATGTCCTCGCAGTCAACGGCCGACGGCAAGCTGACCCTGACCATCACCTTTGCGCTGGGCACT GACCTGGACAACGCTCAGGTACAGGTACAGAACCGTGTGACCCGTACCGAACCCAAGCTGCCCGAGGAAGTGACCCGTATCGGTATCACCGTGGACAAGG CGTCTCCCGACCTAACCATGGTCGTGCACTTGACCTCCCCGGACAACCGCTACGACATGCTGTATCTGTCCAACTATGCCGTGCTCAACATCAAAGATGA GCTGGCACGGCTGGGCGGTGTCGGTGACGTGCAACTGTTCGGTATGGGCGACTACTCGCTGCGTGTCTGGCTGGACCCGAACAAGACGGCTTCACGCAAT CTGACCGCCACCGATGTGGTCAACGCCATTCGTGAGCAGAACCGCCAGGTTGCGGCCGGTCAACTGGGTGCACCGCCCTCCCCGAGCGCGACCAGCTTCC AGATGTCGATCAATACTCAGGGCCGTCTGGTCACTGAAGAGGAGTTCGAGAACGTCGTCATTCGCGCTGGTGCCGATGGTGAAATCACTCGTCTCAAAGA TGTAGCCCGTGTGGAACTGGGCTCCAACCAGTACGCCTTGCGCTCGCTGCTCAACAACAAACCGGCGGTCGCCCTGCCGATCTTCCAGCGCCCAGGCTCC AACGCCATCGATATCTCGAATGACGTGCGCAGCAAAATGGCCGAGCTGAAAAAAGGCTTCCCTGAAGGCATGGACTACAGCATCGTCTATGACCCGACCA TTTTCGTGCGCGGCTCCATCGAAGCGGTGATCCATACCCTGTTCGAAGCACTCATCCTGGTCGTTCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGGTGGCCGTACCGGTTTCGCTGATCGGTACATTCGCGGTCATGCACATGTTCGGCTTCTCCCTGAACGCACTGTCGTTGTTCGGG TTGGTACTGGCCATCGGGATCGTGGTGGACGACGCCATCGTCGTCGTGGAAAACGTCGAGCGTAATATCGAGCTGGGACTGTCGCCCATGGAGGCGACCC ACAAGGCCATGGGCGAAGTGACCGGGCCGATCATCGCCACGGCGCTGGTGCTGTGTGCGGTCTTCGTACCGGCGGCGTTCATTTCCGGGCTGACAGGTCA GTTCTATAAACAGTTCGCCCTGACCATTGCCATCTCGACGGTGATCTCGGCATTCAACTCCCTGACCCTGTCGCCAGCTCTGGCCGCGGTCCTGCTCAAG GCTCATGGTGCGCCAAAAGACAAGTTCTCACTGTTCCTGGACCGGATACTCGGTGGCTGGCTGTTCCGTCCGTTCAACCGTTTCTTCGAGAAAGCCAGCC ATGGCTATGTCGGCACCGTCGCCCGTGTCATCCGCAGCAGCGGTATCGCACTGGTGGTTTACGCCGGTCTGATGGTCATGACCTGGATGGGCTTCTCCAG CACGCCGACCGGCTTCGTACCGAGCCAGGACAAGCAGTATCTGGTCGCCTTCGCCCAGTTGCCGGACGCCGCCAGCCTGGATCGCACCGAAGATGTCATC AAGCGTATGTCCGAACTGGCACTGCAACAGCCAGGCGTGGAAAACGCCATCGCCTTCCCGGGCCTGTCGATCAACGGTTTCACCAACAGCCCCAACAATG GCGTGGTGTTCGTCGCCCTCAAGGACTTCGACCAGCGCAAGGACCCGAGCCAGTCGGCCAATGCCATCGCTGGCGCGCTGAACGGCAAGTTCGCCTCCAT TCAGGATGCTTACATGGCGATCTTCCCGCCACCGCCGGTACAAGGGCTGGGCACCATTGGCGGTTTCCGCCTGCAAGTCGAAGACCGTGGCAACCTGGGC TATGACGAGCTGTACAAGGAAACCCAGAACGTCATCACCAAGAGCCGTAGCGTGCCGGAACTGGCAGGCCTGTTCACCAGCTACACTGTGAACGTGCCTC AGGTCGATGCCGCCATCGACCGTGAAAAAGCCAAGACACACGGCGTTGCCATCAGCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGTTGTATGC CAACGACTTCAACCGCTTCGGTCGCACCTACCAGGTCAACGTTCAGGCCGAGCAGCAGTTCCGTCAGGAGTCTGACCAGATCGGGCAACTCAAGGTGCGC AACAATCTGGGTGAAATGATCCCGCTGGCGACTTTCGTCAAGATCAGCGACACCGCAGGCCCCGACCGTGTGATGCACTACAACGGCTTCATCACCGCCG AGATCAACGGTGCGGCTGCACCGGGCTACAGCTCCGGGCAAGCCCAGGCGGCCATCGAGAAACTGCTCAAGGAAGAACTGCCCAACGGCATGGTTTACGA GTGGACAGACCTGACTTACCAGCAAATTCTTTCGGGCAACACCGCGCTGTTTGTCTTCCCGCTCTGCGTACTGCTGGCCTTCCTGGTATTGGCGGCCCAA TACGAAAGCTGGAGCCTGCCACTGGCCGTGATCCTGATCGTACCGATGACGCTGCTGTCGGCCATCGCCGGGGTCATCATTGCCGGTAGCGACAACAACA TCTTTACCCAGATCGGACTCATCGTACTGGTGGGCCTGGCGTGCAAGAACGCGATTCTGATCGTCGAGTTCGCCAAGGATAAACAGGAAGAAGGCATGAG CCCGCTGGATGCGGTACTGGAAGCCTGCCGCCTGCGTCTACGCCCGATCCTGATGACCTCGTTCGCCTTCATCATGGGTGTGGTGCCACTGGTGCTGTCC AGCGGTGCCGGTGCCGAGATGCGTCATGCTATGGGCGTGGCGGTGTTCTCCGGCATGCTCGGGGTGACCTTCTTCGGTCTGCTGCTGACGCCGGTGTTCT ATGTGCTGATCCGTAACTATGTAGAGCGCCAGGAAGCCCGCAAGGCAGCCAGGGCACAGAAACTGAACACCTTGCCTGCGGAGATGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCGCGCTTAAACTTTTCGCTCCGGCCCTGCTGGTCCTGGCGCTGGCGGCTTGTGCCGTCGGCCCGGACTACAAGGCCCCCGAAACGGCTCCGGCAAA ACTCGCTTCGGCCGCTCAGGGCAACCACGACCGCAGCAAGGTGGATACCCTGTGGTGGCAGCAGTTCGACGATCCGACCCTGAACACGCTGGTCAGCCGC TCCCTGGATGGCAACCGTGATCTGCGCGTGGCCTTTGCCCGCCTGAAATCGGCCCGGGCGATTCGCGATGACGTCAGCAACGACGCCATGCCCGTGATCA CCAGCCGTGCCAGCAGCGATCTGGGCAAAGGCCAGCAACCGGGCACCACCGAGCGCCGAGTCAATAGCGAGCGCTATGATCTGGGTCTGGACATGGCCTG GGAGCTGGACCTGTTCGGTCGCATCCAACGGCAACTGGAAGCCAGCGAAGCCGATCAGCAGGCCGCCGAAGCCGACCTGTATCAGCTTCAGGTGACGCTG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MNFSKFFITRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRASFPGANPKVIGETVASPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAVLNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVNAIREQNRQVAAGQLGAPPSPSATSFQMSINTQGRLVTEEEFENVVIRAGADGEITRLKDVARVELGSNQYALRSLLNNKPAVALPIFQRPGS NAIDISNDVRSKMAELKKGFPEGMDYSIVYDPTIFVRGSIEAVIHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHMFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLSPMEATHKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK AHGAPKDKFSLFLDRILGGWLFRPFNRFFEKASHGYVGTVARVIRSSGIALVVYAGLMVMTWMGFSSTPTGFVPSQDKQYLVAFAQLPDAASLDRTEDVI KRMSELALQQPGVENAIAFPGLSINGFTNSPNNGVVFVALKDFDQRKDPSQSANAIAGALNGKFASIQDAYMAIFPPPPVQGLGTIGGFRLQVEDRGNLG YDELYKETQNVITKSRSVPELAGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQVYLGSLYANDFNRFGRTYQVNVQAEQQFRQESDQIGQLKVR NNLGEMIPLATFVKISDTAGPDRVMHYNGFITAEINGAAAPGYSSGQAQAAIEKLLKEELPNGMVYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAIAGVIIAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMSPLDAVLEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNYVERQEARKAARAQKLNTLPAEMH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site