Pseudomonas cichorii JBC1, BH81_RS08895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
TGATCACGTCATGCACCGCCACGTTGACCCTTGGGTAAAGCCCGCGAAAGACCTTCAATGCGCCCGGCAACAGATTGCCCGCAAACGAAGGCATTGCCGC CACCGACACTTTGCCCATCTGCAGCGTGAAGCGCTGGCGCAGCAGTTCTTCGGTGTTGTCCCAGTCGGCCAGCAACTGGCGCGCCAGCGGCAGCAGGGTT TCGCCTTCCGGGGTCAGGCTGACCGTACGCGTGGTGCGCGTGAGCAACTGACCGCCTAAATCCTCCTCCAGGCTCTTGATGGTCAGGCTCAGGGCCGGCT GCGACAGATGCAATCGCTCTCCGGCCTGGGCAAAGCTCAGGCATTGGGCAACCGCCAGAAACGCCCGAAGCTGTTTGACGTTCATATATTTGCTTTTCTT ATCAATTGATCAGAAAAACAAAATTAACAAATCACTGAGCGAGAGAGAAGATGCAGGTACAACGGTCCTTGACGATCAACAATAAAAAAGGCGAATCATC
DNA Sequence for Gene
>BH81_RS08895
ATGGCTGGACTCGATAAACGTGTCGCGACCTATGAAGAGGCCCTTGCCGGCCTGACCGATGACATGACGGTGTTGTGCGGCGGCTTCGGTCTGTGTGGCA TCCCGGAAAACCTCATTGCGCAGATCAAGCGCATGGGCATCAAAGGCCTGACGGTGGTTTCCAACAACTGCGGCGTCGATGGTTTCGGCCTGGGCATTCT GCTGGAAGATCACCAGATCAGGAAAATGATCTCCTCCTATGTCGGCGAAAACGCGCTGTTCGAGCGGCAGTTGCTCAGCGGCGAGCTGGAAGTCGAACTC ACGCCCCAAGGCACCCTGGCAGAAAAACTCCGCGCAGGCGGTGCCGGCATCCCTGCGTTCTACACCGCCACCGGCTACGGAACCCCGGTTGCCGAAGGCA AGGAAACCCGCCAGTTCAACGGGCGCAATGTCATTCTGGAAGAGGCCATTACCGGCGACTTCGCCTTGGTCAGAGGCTGGAAAGCCGACCACTTCGGCAA CGTGATCTATCGTCATACCGCGCAGAACTTCAATCCGGTGGTCGCCACGGCGGGCCGGATCACCGTCGTCGAAGTCGAAGAAATCGTCGAGCCGGGCGTG CTGCTGCCTACCCAGATCCACACGCCGGGCATTTATGTCGATCGGGTGATTCAGGGCACCTTCGAGAAACGCATCGAACAGCGCACCGTCAGGAAATCCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACACGTCGCATTTGCGGGCTGTTTCCTCAAGACAGGAAGCGGCGTACAACAAAAAAGAGAGTTCAGACCATGGCACTTTCCCGCGAACAAATGGCTCAAC GTGTCGCCCGTGAATTGAAAGACGGTTACTACGTCAACCTGGGCATCGGCATCCCGACGCTGGTGGCCAACTATGTCCCCACAGACATCGACGTGATGCT GCAATCGGAAAACGGCCTGCTGGGCATGGGCGAGTTTCCCACTGAAGACACCATCGATGCCGACATGATCAATGCTGGCAAACAGACGGTGACCGCACGC ATCGGTGCCTCGATTTTCTCCTCGGCCGAATCCTTCGCCATGATCCGTGGCGGCCATGTGGACCTCACGGTTCTCGGCGCTTTTGAAGTGGATGTCGAGG GCAATATCGCGTCATGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGTGGCGCGATGGATCTGGTGGCGGGCGCCGAGAACATCATCGTCACCATGAC
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGLDKRVATYEEALAGLTDDMTVLCGGFGLCGIPENLIAQIKRMGIKGLTVVSNNCGVDGFGLGILLEDHQIRKMISSYVGENALFERQLLSGELEVEL TPQGTLAEKLRAGGAGIPAFYTATGYGTPVAEGKETRQFNGRNVILEEAITGDFALVRGWKADHFGNVIYRHTAQNFNPVVATAGRITVVEVEEIVEPGV LLPTQIHTPGIYVDRVIQGTFEKRIEQRTVRKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site