Pseudomonas cichorii JBC1, BH81_RS08025 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCAAACTCAACCCGGCGCCGTTCTGCATGCTCGACGAGGTCGATGCGCCACTGGATGACGCCAACGTAGGACGTTATGCCCGCTTGGTGAAAGAAATGT CACAAACGGTGCAGTTCATCTACATCACCCACAACAAGATCGCCATGGAAATGGCCGATCAACTGATGGGTGTGACCATGCACGAACCCGGCTGTTCGCG CCTTGTAGCGGTGGATGTGGAGGAGGCGATGGCCCTTGTGGATGCGTGATCTGTCATGGTATTTCGCCGGGAAATGGCCTTTTAATGGCCCAAATATGTG AAACGGTAGCGATAGATACCACCCTCAGCGCCATACAGGTGCAACAGACGGTGTAAAGTTACCTTTGGTCGTGCTAGTTTAGTGACCACTTTTTTATTTC GACGTGGGCAAAATGCCAGTTAGAACATAGACTTGGCACCACGTATTAAAGGGGTTTAGGCCCTTATTTTGAAAATTCTTCATTAGAGGCACTGGATTAC
|
|
| DNA Sequence for Gene |
>BH81_RS08025
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATAATTGTCATTGCCGGTATTCTCTTCGACGGCTGGCGCCGTATGCGCGGCGGCAAGGGGA AACTGAAATTCAGGCTCGACCGCAGCTTTTCCAATCTGCCGGACGACGATGAAACCACGTCCGCTGAATTGCTCGGTCCATCCCGTGTGCTGGATAACCA CAAGGAGCCTCAGCTGGACGAGCAGGACCTGCCGTCGTTGAGCGCGACCCCGCGTGAGAGCAAGCGCAGCGAAAAGAAACGCAAGGACGAGCCGCAGCAG GGTGACCTGAACCTGGACATGGACGGTCCGAGCCTGTTCACCGACCGCAACGACGACTTCCCGGACGACAAGCCTGCCCAGCGCATCACCGAAGACAAAG ACCTGCCGCCAGTCGAAGAAGTGCTGGTCATCAGCGTGATCTGCCGTGACGAAAGCGGTTTCAAAGGGCCTGCATTGCTGCAGAACATCCTGGAAAGCGG CCTGCGTTTCGGCGAAATGGACATCTTCCACCGTCATGAAAGCATGGCCGGCAATGGCGAAGTCCTGTTCTCCATGGCCAACGCCGTGAAGCCTGGCGTG TTCGACCTGGACGACATCGACCATTTCAGCACCCGTGCCGTCAGCTTCTTCCTGGGCTTACCGGGGCCGCGTCATCCCAAGCAGGCCTTCGACGTCATGG TGGCCGCAGCCCGCAAGCTGGCCCATGAACTCAACGGCGAACTGAAAGACGACCAGCGCAGCGTCATGACCGCTCAAACGATCGAGCATTATCGCCAGCG GATTGTCGAATTCGAGCGTCGTGCATTAACCCAGCGCCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAAAGGATGTGCGTAACAGGAGCGGGTTGGCCCGCTCCTGATGTCAGATTAAGCAGCCCAGGCTGCTTTTTTGCTTTTTGAGAGAACATTGTATGAAGGT CGTCGAAACCCGAATCCTGGAACTGCGCGCAGAGCTGGATCAACACAACTACCGCTATCACGTGCTGGACGAACCCAGCATCCCGGATGCCGAGTACGAC CGCCTGTTTCACGAACTCAAGGCCCTTGAGGCTGAAAACCCGCATCTGGTCACCCCGGATTCCCCGACTCAGCGTGTCGGCAGCGCGGCGCTTTCGGCCT TCACTCAAGTGCGTCACGAAGTCCCCATGCTCAGCCTGGGCAATGCCTTTGAAGAAACCGACATGCGCGAGTTCGACCGGCGCGTGAGCGAAGGCCTCGA CCTGCCGGCAGACGACCTGTTCGGTAGCGGTGCCAAGGTGCAATACAGCTGCGAGCCCAAGCTGGACGGCCTGGCGGTCAGCCTGCTGTATCGCGACGGC
|
|
| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSFSNLPDDDETTSAELLGPSRVLDNHKEPQLDEQDLPSLSATPRESKRSEKKRKDEPQQ GDLNLDMDGPSLFTDRNDDFPDDKPAQRITEDKDLPPVEEVLVISVICRDESGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPGV FDLDDIDHFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDDQRSVMTAQTIEHYRQRIVEFERRALTQRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|