Pseudomonas cichorii JBC1, BH81_RS04020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
CCCGCAACACATTCGCCATTCTCGACCAGAAACAGTGCGCCATGGCTGGCGCACTGGATCAGGCTCGCGCTGTCATCCAGAAACCGGTCAGGCTCCCATT CCAGTGCAATGCCGCGATGGGGGCAGCGATTGCGGTAGACGAACACCCGCCCATGACGACGCACTGCCAGCAGTTTCAGCCCTTCGGTTTCAAACCCGCG ACTTTCTGCCTCGGGAAGGTCGGCAGCGGCACATAGGCGTTTCATGAAGCGTGCTCGCCGGCTTGACGTTTAAATGAAAACAATTATCAAATGACTCCGA TTCTCGAGTTGATGACGGTAAGAGAGCAATGAGGCTTGCCTCTTAATGCAATCTTAATCCGTCGATCCTGCATGTTCGCGGACAATTTCGCCCCTTGTTG CGAGCGCCTCCCAAGGAGTGCTCGCCACGTTGAAACGTTTTGCCCATCACCGGTGCTCATTAAAACTGCCAGGGTCCGGGCTTCTTGAAAGGAAATCTTC
DNA Sequence for Gene
>BH81_RS04020
ATGCGATTTTTCAATAGCAGCGTATGTGCGGCTCTGGTCGGAATTGCCTTCAGTCACATGGCGCAAGCTGCACAGCCTGCTGATACCGAAGCCTCGCAAC GCTGGGTGAGTGCCGGGGGGGCCTTGAGTGAATGGGTCGTTGCGCTGGGCGGCCAATCCAGGCTGGTGGGCGTCGACACCACCAGCCAGTATCCGGAGTC GCTCAGGTCGTTGCCGAGCATCGGTTATCAGCGCCAGCTGTCGTCCGAAGGCATTCTCAGCCTGCGTCCGGACGTGCTGGTCGGGACCGAGGAGATGGGA CCTCCGCCTGTGCTGGAACAATTGCGTGCGGCCAAGGTACAGGTTGAAGTGCTCCCGGCAGGGGCGGATATGGCAACCCTGAAAAGCAACCTGCAACGCC TTGGGGGGCTGTTGGGCGCTCCGGAGCAGGCCGCTCGCCTGATCGAACGTTATCAACAACAACTGGATAACCAGCAGCAGTGGATCGTCCAGGCGCAGAA AGGTGCTGAGGCTCCGGGTGTCCTGCTGCTGGTGGGCCATGGCGGCGGCAAGCCCATGGTTGCCGGCAAGGGGACGGCTGGCGACTGGCTGATTCAACAG GCGGGCGGTCGCAATCTGGCGACCCATGACGGGTACAAGGTGTTTTCGGTCGAGGCCATGGCCGGGCTGGCTCCACAGGTACTGATCGTGGCCGATCGCG CCCTGCGTGGTGATGCCGCTCGCAAGGCGCTGTTCAAGGAAAACCCTGCATTGTCCGCCACGCCTGCGGCACGCGATGACCGGGTGTTCGATCTGGACCC GACGCTGCTGGTGGGTGGTCTGGGCCCACGTCTGCCCGACAATCTGCAAAAGTTGTCTCACGCGCTTTACCCAACTGCCAAGCCCTTGAGCGCTGCCGTT CGCTCTGAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCCCTGATATCAGCGCGTGCTCTGTTTATCGGGCTGACAGTCCTGTGCATCGCTGCATTCTGGCTGTCGCTGGCCCTCGGGCCGGTGAGTCTGCCGCT GGCCGATACCTTGCGTGCGGCTTTGCGGCTGCTGGGGATGCCGGTGGCGGGGGAGAATCTTGAGCAAGCTGAACTGATTCTTGGCCAGATTCGTGTGCCG CGCACTTTGCTGGGCCTGGCGGTTGGCGCAGTGCTGGCGTTGTCCGGGGTGGCGATGCAGGGGCTGTTCCGAAATCCGCTGGCCGATCCGGGGTTGGTCG GGGTTTCCAGTGGTGCTGCGCTGGGGGCGGCACTGGCGATTGTGGGCGGTGCCTTGTGGGGAAATGTCTCGCAGGTTATCGCGCCTTATCTGTTGTCGGT CTGTGCGGTGGTCGGTGGGCTGGTGGTGACCAGCATGGTGTACCGGCTGGGCCGGCGAGATGGCCAGACCAGCGTTGCAACCATGCTGCTGGCCGGTATT
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRFFNSSVCAALVGIAFSHMAQAAQPADTEASQRWVSAGGALSEWVVALGGQSRLVGVDTTSQYPESLRSLPSIGYQRQLSSEGILSLRPDVLVGTEEMG PPPVLEQLRAAKVQVEVLPAGADMATLKSNLQRLGGLLGAPEQAARLIERYQQQLDNQQQWIVQAQKGAEAPGVLLLVGHGGGKPMVAGKGTAGDWLIQQ AGGRNLATHDGYKVFSVEAMAGLAPQVLIVADRALRGDAARKALFKENPALSATPAARDDRVFDLDPTLLVGGLGPRLPDNLQKLSHALYPTAKPLSAAV RSEP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site