Pseudomonas cichorii JBC1, BH81_RS03800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCTGCTATCGAAGCCAAGATCGAAGAGCTGTCCAAGGTTTCCGCGCCAATCGCTCAGAAAATGTACGCTGAGCAGGCTGAAAACCCTGAAGCGGCTGC CAAGCCTGCTGAAGAGAAAGCCAAGGCTGACGACGTGGTCGACGCCGAGTTTGAAGAAGTGAAAGACAACAAGTAAGCGCAGGCTTGCTTGAAAGCCAGT TGACCCGTTCCGAGCGGTGGCTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGAGCAGGCAAAATTCCGGCGTTCGGGTCAAG GTCCGTACGCCCTGTGGCAAGGTCGTCATGCTCCTGCGTGGCGATTCGTTCTGCCGCTTTCTCGGTCAGGCAACTGGCTGTCTAAACAAGACCAGGATCG TTGAATTGACGTGAGTTGGGTCCGGGCCTGTATGGGGCTCAACGAGTTTGGCAAGGCTCAGGAGGGTCTTGCCGAACGTCCTCAAGAGTGCGGAAGAATT
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| DNA Sequence for Gene |
>BH81_RS03800
ATGGCAAAGCGTGATTATTATGAAGTGTTGGGGGTGGAGCGGGGTGCCAGCGAGGCTGAGCTGAAGAAGGCTTATCGCCGCCTTGCGATGAAGCACCACC CAGACCGCAACCCTGATGACAAGGCTGCGGAAGAGCTGTTCAAAGAGGCCAATGAGGCCTATGAAGTTCTGTCCGATGCCAGCAAGCGTGCGGCATACGA TCAGTACGGCCACGCCGGCATAGACCCGAGCATGGGTGGCGGTGGTTTCGGTGGCGGCGCTGGCGGTGCGAACTTCTCCGATATTTTCGGTGACGTGTTC AGCGACTTCTTCGGTGGTGGCCGTGGTGGTGGCGGTCGTGGCGGCGCACAGCGCGGTAGCGATCTGCGTTACACCCTGGAACTGGACCTCGAAGAAGCGG TTCGCGGTACGACCGTGAATATCCGTGTTCCGACGCTGGTCAATTGCAAACCTTGCGATGGCAGCGGTGCGAAGAAAGGTTCTTCGCCGGTCACTTGTCC GACATGCGGCGGCATTGGTCAGGTGCGCATGCAGCAGGGGTTCTTCTCCGTGCAGCAAACCTGTCCTCGTTGCCATGGTCACGGCAAGATCATTTCCGAT CCGTGCGATTCGTGCCATGGCGAAGGCCGTGTCGAAGAATCCAAGACCCTCTCGGTCAAGGTTCCGCCAGGTGTCGATACCGGTGACCGCATTCGTCTGT CCGGCGAAGGCGAGGTGGGCTCCCAGGGCGGGCCGACCGGCGACCTGTACGTTGTGATCAATGTGCGTGAACACGCCATTTTCCAGCGCGACGGCAAGCA TCTGTATTGCGAAGTGCCAATCAGCTTCACTGACGCGGCGCTGGGTGGCGAGCTTGAAGTGCCGACGCTGGATGGTCGGGTCAAGTTGAAGATCCCTGAA GGCACCCAGACCGGCAAGCAGTTCCGCTTGCGTGGCAAGGGTGTGGCTCCGGTGCGTGGCGGCGGTGCTGGCGACTTGATGTGTCGTGTTGCGGTTGAAA CGCCGGTCAACCTCGGCAAGCGTCAGCGTGAACTGCTTGAAGAGTTCCGTACTTCGCTTGAAGGCGACGACTCTCACTCTCCGAAAGCCAGTGGCTGGTT CGAGGGTGTGAAGCGTTTCTTCGGTGACTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCTGACTGGGCAGGAGAAGGTTATGCGACGTATTGCTGTGGTAGGCGCCGCCGGGCGCATGGGTAAGACTTTGATTGAGGCGGTTCTGTCGGCGCCGG GCGCCGGGCTGACGGCAGCCATTGATCGTCCGGACAGCACGCTGGTGGGTGCTGATGCCGGAGAGCTGGCTGCGCTGGGTCGTATCGGCGTGCCGTTGTC GGGTGATGTTGCCCGGGTTGCCGATGAGTTCGATGTGTTGATCGACTTCACGCACCCTACGGTGACGCTCAAGAATCTGGCTTTCTGCCGCAAGGCGGGC AAGGCCATGATCATCGGCACCACGGGTTTCAGTGCTGAAGAGAAGCTGCAACTGGTTGAGGCAGCGAAAGAGATCCCTATCGTTTTCGCTGCCAACTTCA GCGTGGGTGTGAACCTCTGCCTGAAGCTGCTGGATACGGCTGCTCGCGTGCTGGGCGACGACGTCGATATCGAAATCACCGAAGCTCACCACCGTCACAA
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGASEAELKKAYRRLAMKHHPDRNPDDKAAEELFKEANEAYEVLSDASKRAAYDQYGHAGIDPSMGGGGFGGGAGGANFSDIFGDVF SDFFGGGRGGGGRGGAQRGSDLRYTLELDLEEAVRGTTVNIRVPTLVNCKPCDGSGAKKGSSPVTCPTCGGIGQVRMQQGFFSVQQTCPRCHGHGKIISD PCDSCHGEGRVEESKTLSVKVPPGVDTGDRIRLSGEGEVGSQGGPTGDLYVVINVREHAIFQRDGKHLYCEVPISFTDAALGGELEVPTLDGRVKLKIPE GTQTGKQFRLRGKGVAPVRGGGAGDLMCRVAVETPVNLGKRQRELLEEFRTSLEGDDSHSPKASGWFEGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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