Pseudomonas cichorii JBC1, BH81_RS02540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCCGCCAGCCGACGCCGGCCCAAGGCAGCCCGGAGCAGTTGATTCGCCGGTATCTGTTGCAGAAGAAAATCGCGATTTCCCATTGCTGCACCCTGTTGC GGCGGGATCTTCTGCTCCAGCGTCCTTATCCGCAAAGCCTGCGCTCGGGCGAGGATATTCCGGTGTTTGCCTACGTTCTGGTCAGCGCACCTGTTGCGCT GGTGCAGCAGCCGATCGCGCGTATCTACAAGCACGCCGACAGCCTGCGCCATAGCCGTGCCGACGAAGAAAGTGTGGCCACAGGGCTGATCAAGGAAGTA TTCGCACACCTGCCGGACGAGTGCCGTGTTCTTCTGCCTCGCTATTCTGCTCAGGTCTATCTCTCGTTGTTTCGCGCCGCTCAACTGGCTGGCGATTACT CCGTGGCGCGTCGCTATTACCTGCGTGCTCTTCGTTTCAGTCCCTTGCAGGCACTGAAGTGGAGTTACGTGCGCAAGGCGCTCAAGTTCGGGAAGCGCTG
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| DNA Sequence for Gene |
>BH81_RS02540
ATGCGCATTCTGGTCCTGACCTGCACGCCGAGAGAGCCCGATAACCGCCAGCTATGGCAGGGCCTCAAGCGCTTTGGCGATGTGGAAGTGCGCTACGTCG ATCGCGAGCAGCACAAGCAGTTGGGCCGTGTCTTGAGCGGGATCGATTTCTCGCTCTATGACCGCGTTGTGGTCGATCTGCTCTTTCGCTACCTGTGCAG GCAGGCTCGCCAGCTCAAGCGTATTTCAGGGCTGCTGATCTACGAGGAAGATGCCTGTCAGGAGTTCATTTCCGGCTCGCGGTGGCAGGGGAAGTTTTCC GCTTTCTATCGCAGGATACCCAACGCCAGGGTGATCATGACCGGCTTTCGAGTCGCCGAGCGCTTTCGTGAAATGGGCGTCGATGCCCACTTTCTGGCCA AGGGCTATAACTCTTCCTCGTTATACGTCAGTGGCATCGAGCGTGATATCGAGCTGGGATTCATCGGTCGTCTGGGCAGCGATACGTACCGTGAGCGGAG GGATTTCCTGCAACGTGCCGTTGAGCGCTATCAGCTTGAGCTCATGCGAACAGCGCCCGGCGACGAGTACCGTGAAGCGCTCAATCGCATCCGGGTATTT GTCAGTGCGGATATCGGGCTTGGCGAATACATGGCGAAGAACTTCGAGGCCATGGCTTGCGGCTGTGTATTGCTGGCTTACCGCCAGGGGCAGGGCGAAG AGCAGGCGATCGGCCTGGAGGATGGCGTCAATGCCATGCTCTACGACAATGAGCAGGAGTTTTCGGAAAAGCTGGCACTGTTACGCAGTGACCCCGCGCT GCTTGCCCGTGTCGGGGAGCAGGGGCTGCTTTTTGCGCAGCAGTATCTTGATTACTTCAAGCAGTCCGAAGTCGTTTTTCGGCACCTTTCGCAGGACTTC CCGGCGCCTGACGTCATGAGCCTCTTTGACCGGCTGATGTTCAAGCTCGGAAGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTCCGGCTTTTCTCAGGCTCTTGCCTGATTCGCTGCCACTTCATAAGCACGCATGAGCTCATCCCACGGGAAGTCGGAAATCTTGCTGCGTCGCAGG TAATTCTGCAGATGCTGGAAGTTGCGTCTTACCATCGACTTGCTGAGCGGCTTTCTCTTGAAACGGGTGTCGAGGAAGTCGATCAGGCCAAAACCCTGGT CGGGCGTACGCAGCACATTGCCCAGATGCAACGAACGGAAATAGATGCCTCGTTGATGCAGGAAGTGGATGTAGCGGGCAAGTTCAGGCAGCAGGTTCAT GAAAGTCTCGAACGACTGCTTGTAGAGCGAGTCCAGAGGCGTGCCGGGCAAAGGTTGATACAGGCATGCGCTGATCCCTTTGGAAGGCTCGACCCAGAAC ACATCGTTGACCTGCGGCGTATTGATGCCGCGCTCGCGCAGGCGGCAGCTTTGCTGATAGAAACGTTGAGCATCGGGGTTCAAACGAACCAGAAACGGAT
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| Amino Acid Sequence |
>hypothetical protein
MRILVLTCTPREPDNRQLWQGLKRFGDVEVRYVDREQHKQLGRVLSGIDFSLYDRVVVDLLFRYLCRQARQLKRISGLLIYEEDACQEFISGSRWQGKFS AFYRRIPNARVIMTGFRVAERFREMGVDAHFLAKGYNSSSLYVSGIERDIELGFIGRLGSDTYRERRDFLQRAVERYQLELMRTAPGDEYREALNRIRVF VSADIGLGEYMAKNFEAMACGCVLLAYRQGQGEEQAIGLEDGVNAMLYDNEQEFSEKLALLRSDPALLARVGEQGLLFAQQYLDYFKQSEVVFRHLSQDF PAPDVMSLFDRLMFKLGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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