Pseudomonas cichorii JBC1, BH81_RS00115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCAGCAACTTCCCGCGCCGCAACCGGATCATCAGCGGGCTGTCTCTGGGTGTGCTGGTGGTGGAGGCCAGTGTGGGCAGTGGTTCGTTGATTACGGCGC GACTGGCGGCCGAGTATGGTCGAGAGGTCTATGCCATTCCCGGCTCCATCCATCATCCCGGTGCCCGTGGTTGTCATCAGCTGATCCGCGATGGCGCGGT GCTGGTGGAAACCGTTGACCATATTCTCGAAGCGCTGCAGCACTGGCATCGCCTGGCACCCGAGGCTTCCAAACCAGAGCAACCGGCCTCTTCTTCAAAA CACCCCTTGCTGAAGATCCTGCATGCTGCGCCGCATACCAGCGAGGCACTTGCAGCGGCCAGTGAATGGCCGTTGCCTCGGGTGCTTGCAGCCCTGACCG AACTGGAACTGAACGGAATGATCAGCAATGAAGCCGGACGATGGTTCGCACGGGCACCCTGAGGTTAAACTGCCCGGCAAGATTTAGCGGAGATACATCA
DNA Sequence for Gene
>BH81_RS00115
ATGGTCAGCAGTTGGCGTGTGCAGCAAGCCGCTCGAGATATTCGTGCCGGAGCGGTGATTGCCTATCCAACCGAGGCAGTCTGGGGACTTGGTTGCGATC CGTGGGATGAAGAAGCGGTTTATCGTCTGCTGGCGATCAAATCGCGGCCTGTGGATAAAGGGCTGATTCTCATCGCCGACAACATCCGTCAGTTCGACTT TCTGTTCGAGGACTTCCCCGAGCAGTGGATCGACCGCATGGCCAGCACCTGGCCGGGTCCCAACACCTGGCTGGTGCCGCATCAGAACCTGCTGCCCGAG TGGATCACCGGTGTGCATGAAACCGTGGCCCTGCGCGTGACCGATCACCCGACCGTGCGTGAGCTGTGTGCTCTGGTCGGCCCCCTGATTTCCACCTCTG CCAACCCTGCCGGTCGCCCCGCTGCCCGCACGCGTCTTCGCGTGGAGCAATATTTCCGTGGGCAGATCGATCTGGTGCTCGGCGGCAGCCTGGGCGGTCG CCGAAACCCCAGTGTCATTCGAGATATCGAGACCGGCCAGGTGGTGCGACCCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAATCAGAATCGTCGATCCCGTGGTGCGCCGTGCCGACAGTTCGATCTGCGCCTGGGCGGCGTCCTTCAGGGCGTATTGCTGGATATCGTTGAGCTTGA TCTTGCCGCTGGCGAGCATGTTGAACAGGTCATCGGCCATCGCTTGCAGGTTCTGCGCGTTGTTGGCGTAGCTGCCCAGGGTCGGGCGGGTCACGTAAAG CGAACCCTTCTGCGCCAGAATCCCCAGATTCACGCCTGAAACCGGACCGGAGGCATTGCCGAAGCTGACCAGCAGACCGCGAGGTGCCACGCAGTCGAGG GAGGTCAGCCACGTGTCCTGGCCGACGCCGTCGTAGACCACCGGGCACTTCTTGCCTTCGGTCAGTTCCAGTACCCGGCTGGCCACGTTTTCATGGCTAT AGTCGATGGTTTCCCACGCACCCAGGGCTTTGGCGTGCTCGGCCTTTTCCGGTGAGCTGACGGTGCCGATCAGGTTTGCTCCCAGAGCTTTCGCCCATTG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAARDIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKSRPVDKGLILIADNIRQFDFLFEDFPEQWIDRMASTWPGPNTWLVPHQNLLPE WITGVHETVALRVTDHPTVRELCALVGPLISTSANPAGRPAARTRLRVEQYFRGQIDLVLGGSLGGRRNPSVIRDIETGQVVRPG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site