Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS27165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00004
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00004
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 157 347 1.4E-69
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 673 691 3.6E-33
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 848 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 595 756 2.0E-8
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 542 2.1E-44
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 595 758 2.8E-40
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 348 8.5E-10
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 563 764 7.40434E-79
CDD cd00009 AAA - - 188 339 7.28899E-14
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 348 440 2.6E-29
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 18 848 0.0
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 766 856 0.0028
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 544 838 5.73E-55
Coils Coil Coil - - 449 469 -
Coils Coil Coil - - 501 521 -
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 548 764 9.9E-80
Gene3D G3DSA:1.10.8.60 - - - 768 858 8.4E-7
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 599 617 3.6E-33
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 5 154 2.4E-19
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 644 662 3.6E-33
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 494 5.22E-69
Coils Coil Coil - - 410 437 -
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 339 1.4E-9
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 706 720 3.6E-33
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 548 764 4.9E-65
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 17 123 4.51E-9
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 156 347 2.8E-84
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 770 840 9.9E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.