Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS19920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain UFB2, complete genome. [Details]
DNA Sequence Upstream of Gene
CATCAAGCTGGCGGTATTCGATGTGGACGGCGTACTGACCGACGGTCGCCTGTATTTCCTCGAGGACGGCAGCGAATTCAAGACCTTCAACACCCTCGAC GGCCAGGGCATCAAGATGCTGATGGCCGCCGGCGTGCAGACCGCGATCATCAGCGGCCGCAAGACCCCGGTGGTCGAACGGCGCGCCAAGAACCTCGGCA TCCCGCACCTTTACCAGGGGCGCGAGGACAAACTCGTCGTCCTCGACGAACTTCTGGGCCAACTCAACCTAAGCTATGAACAGGTGGCCTACCTCGGTGA CGACCTGCCGGACCTGCCGGTGATCCGCCGCGTCGGCCTTGGCATGGCCGTGGCCAATGCGGCCGGCTTCGTACGCGAGCACGCCCACGGTGTGACCACG GCGCGCGGCGGCGAAGGCGCGGCCCGCGAATTCTGTGAACTGATCCTGCGCGCCCAGGGCCGCCTCGAAGCGGCCAACGCCGCGTACCTGTGAGCCAATT
DNA Sequence for Gene
>VM99_RS19920
ATGCTGAGCAAGAAGATTCGCACCATCGTGGTGTTTGCCTGTATCGCGGCGATTTTCGCGGCGGTGGGCTACTGGAACATCAGCCCGGAACGGTTTCTCG ACCAGCCCGCGCCGGTGGTCGAGGAAAAGATCGACTGGTATGCGACCAACACCCACACCCTGCAATACCTGCCCGACGGAAAAGTGCAGTACGAAATGAC AGCCGACAAGGTCGACCACGTCAAGGCAACCGACATTACGCTGGTCACCACGCCGGACCTGAACATGTTTCGCGGCACCGAGTTTCCGTGGCACGTGCAG AGCAAGCGCGCCGAAGTCAATTCCGGCGGCACCGAAGTGGAGTTGATCGACTCGGTGCGCGTGGCCCGGACCGACGAGAAGAACCGCACGACCATCATCA CCAGCACACGCATGACGGTGTTCCCGCAGCAACAATATGCGCAGACCGAGCAACCCGTTAGAATCGACGGCGCCGGGGGTGTATCGACCGGCACGGGAAT GAAGGCGTATTTGAAGGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAAGCTCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGCGAGCGCCTGGGCTCTTCCCAACGACCGCGACCAGCCTATCCGCATCCAGGCCGAC GACGCCCAATTGGACGACAAGAACGGCGTAGCCACCTACAAGGGCGATGTGATCATCACCCAGGGCTCGATGAAAGTGACCGGCAACACCGTGACCATCA CGCGCACCCAGTCCGGCGACATCGACGTGGTGACCTCGGTCGGCAACCTGGCCTACTTCGAGCAGTTGCAGACCGCCGGCGACACCAAGCCTGTGCAGGG CTATGGCGTGACCATCCAGTACCACGCCTCCCAGGACCGCGTCGTTCTGATCGACCGCGCCAAGGTCGTCGACAAGGACAACAACGTCACCCAGGGTGAG AAGATCGTCTACGACACCAACAAGAAACTGGCCAGCGCCGGTCGCGCCACCGGCAGCAAGGTGACCGAGCAGCGCCCACGGATCGACATGGTGATCCAGC
Amino Acid Sequence
>LPS ABC transporter permease
MLSKKIRTIVVFACIAAIFAAVGYWNISPERFLDQPAPVVEEKIDWYATNTHTLQYLPDGKVQYEMTADKVDHVKATDITLVTTPDLNMFRGTEFPWHVQ SKRAEVNSGGTEVELIDSVRVARTDEKNRTTIITSTRMTVFPQQQYAQTEQPVRIDGAGGVSTGTGMKAYLKESRIHLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site