Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS17470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain UFB2, complete genome. [Details]
DNA Sequence Upstream of Gene
GACGCGCCTTGAGCCAGGCCTCGACGGCCGCACGCTGCTCTTCGGAAACCGAGCCACGCTTCTGCAGGCAAACCAGACCGTAGTCGTCGCCGCCCACGTA GCCCAGGCCATTGGCTTCCATGGCTTGTTTCAAGAAAGCGTCGAGGAAAGCGTCAATAGCCTCGTCGGCCAGATCTTCTTTGAAATCCAGGTTCAATTCG AAACCCAGCTCTTGAAATTCATCCACGCACAGTTTTTTGCGCAGACGCTGGGAACGGTTAGTCGCCATTGGAACAATCCTCTTAAGTAATAACGGCCGGC ACTTTACCAGTTTGGTGCATCAATTGCCCGACTGTTCGGGGGGATCGACCTACCGTCGGTAAAAAATAGCGTCGCGAAGGGCCAGGGTACGGGCCAAGCC GTTGCAGCTTGGGGCATAATGCCGACACTTTCATGACCGTTGAGGGCGTTCATTTTCATGTCCTCGTCTTTTCCCCCTCGCCTGTAGGGTTTTATTTCAA
DNA Sequence for Gene
>VM99_RS17470
ATGATCAAATCTTTGCGTCCACTGCTTCTGGCCAGCCTTCTTCTTCCCTTGGCCCTCCCTGTTTCCACCAGCGCCGCCACGATCAACACCGCCTTGTCAC CCAACGTGCAAAAGGCCCTCAAGACCAGCAAACTGCAAGACAACGCCTTGTCCCTGGTGATGGTGCCGCTCAACGGCCCCGGCACCCCGACCGTCTATAA CGCCGACGTCTCGGTCAACCCAGCGTCCACCATGAAACTGGTGACCACCTACGCGGCCCTGGAGATGCTCGGCCCCAATCATCAGTGGAAAACCGAGTTC TACACCGACGGCACCCTCAACAGCGGGATCCTCAACGGCAACCTGTACCTCAAGGGCGGCGGCGACCCCAAGCTGAACATGGAAAAACTCTGGCTGCTGA TGCGCGACCTGCGGGCCAATGGCGTGCAGCAGGTCACCGGCGACCTAGTGCTGGACCGCGGTTTCTTCATCCAGCCGCAACTGCCGGAGTTCAACGACGA CGGCAACGACGAGAACAAACCGTTCCTGGTCAAGCCCGACGCCCTGCTGGTCAACCTCAAGGCCCTGCGCTTCGTCGCTCGCAATGACGCCGGCCGGGTG CTGGTGTCGGTGGAACCGCCGATCGCCAGCATTCGCATCGACAACCAGGTCAAGGCCGTCAACGGCAAGCAATGCACCGGCGGCGTGCGCTATAACCCGG TGCCCCAGGCAGACGGCAGCGTGACCGTGACCGTCGGCGGCCAACTCGGCGAGGGGTGCAGCTCCCAGACCTACCTGTCGCTGCTGGACCACGCCACCTA CACCGCTGGCGCCGTGCGAGCCATCTGGAAGGAACTGGGCGGCAGCATCCAGGGCAAGGATCGCCTCGCCGCGACTCCGAGCGGTGCAAAACTGCTGGCC CGGGCCTTCTCGCCGGACCTCGCGGAAATCATCCGCGACATCAACAAATACAGTAACAACACCATGGCCCAGCAGTTGTTCCTGAGCCTCGGCGCGCAGT TTCGCAACGAAGCCGACGGTGACGACGCCAAGGCCGCGCAGCGGGTCGTGCGCCAGTGGCTGGCCAAGAAAGGCATCACCGCGCCACACCTGGTGATGGA GAACGGCTCCGGCCTGTCCCGCGCCGAACGTGTCAGCGCCCGGGAAATGGCGGCGATGCTGCAAGCCGCCTGGCGCAGCCCTTATGCCGCCGAATACATC AGCTCGATGCCGATCGCCGGCACCGACGGCACCATGCGCAAGCGCCTCAAGACCACCGCCATGGCCGGCGAAGCCCACGTCAAGACCGGCACCCTGAACA CCGTCCGCGCCATTGCCGGCTTCAGCCGTGACATCAACGGCAACACCTGGGCCGTGGTTGCCATCCTCAACGACCCCAAACCCTGGGGCGCTTCGTCCGT ACTGGACCAGGTCCTGCTGGACCTGTACCGCCAACCGAAACTGCCACAGACCGCCTCGGTACTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGGGACCGCCCCCGGCTGCCAATGGGTCGCCGGGGGCAAGCAAAACCCGGAACTCCCCCCAATCCAATGGTGGGACCGAGCTTGCCCGCGAAACCGGT CTGCCTGCACCGATGATGTTGGCTGGGCCGGCGCCTTCGCGGGCAAGCCCGCTCCCACAGGGACCTTTGCCAGGCGCAGGTTTTATGGACATCCCCCATT TAATGGTGGGAGCGGGCTTGCTCGCGAAAGCGGCCTGTCTGGACCGATGATGTTGGCTGGGCGGGCGCCTTCGCGGGCAAGCCCGCTCCCACAGGGACCT TTGCCAGGCGCAGATTTTATGGACATCCCCCATTTAATGGTGGGAGCGGGCTTGCTCGCGAAAGCGGTCTGTCTGAACCGGTGATGTTGGCTGGGCCGGC GCCTTCGCGGGCAAGCCCGCTCCCACAGGGATCTTTGCCAGGCGCAGGTTTTATGGACATCCCCCATTTAATGGTGGGAGCGAGCTTGCTCGCGAAAGCG
Amino Acid Sequence
>D-alanyl-D-alanine carboxypeptidase
MIKSLRPLLLASLLLPLALPVSTSAATINTALSPNVQKALKTSKLQDNALSLVMVPLNGPGTPTVYNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEF YTDGTLNSGILNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGDLVLDRGFFIQPQLPEFNDDGNDENKPFLVKPDALLVNLKALRFVARNDAGRV LVSVEPPIASIRIDNQVKAVNGKQCTGGVRYNPVPQADGSVTVTVGGQLGEGCSSQTYLSLLDHATYTAGAVRAIWKELGGSIQGKDRLAATPSGAKLLA RAFSPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNEADGDDAKAAQRVVRQWLAKKGITAPHLVMENGSGLSRAERVSAREMAAMLQAAWRSPYAAEYI SSMPIAGTDGTMRKRLKTTAMAGEAHVKTGTLNTVRAIAGFSRDINGNTWAVVAILNDPKPWGASSVLDQVLLDLYRQPKLPQTASVL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site