Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS16770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30244 TRANSAMINASE IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 6 373 9.5E-97
Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 16 373 6.7E-91
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 5 381 1.6E-125
NCBIfam TIGR02379 JCVI: dTDP-4-amino-4,6-dideoxy-D-glucose transaminase IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like 6 377 0.0
CDD cd00616 AHBA_syn IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 17 374 0.0
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 6 379 6.53E-100
PIRSF PIRSF000390 PLP_StrS IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 1 381 8.9E-110
FunFam G3DSA:3.40.640.10:FF:000037 dTDP-4-amino-4,6-dideoxygalactose transaminase - - 5 252 2.1E-128

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.