Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS16665

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain UFB2, complete genome. [Details]
DNA Sequence Upstream of Gene
CAACGGCGAAACCAGCCGTGCCCCTTGGAGCGCCGACGAATTGGCGCGTTTCACCCGCTTGGTGCAGGACGCCGTCGGCTTCGACGCCAGCCGCGGCGAC AGCGTCAGCGTGATCAACGTGCCGTTCTCTTCGGAGCGCGGGGAAGTGATCGCCGATATTCCGTTTTATTCGCAACCCTGGTTCTGGGATGTGGTCAAGC AGATATTGGGCGTGCTGTTCATCCTGATCCTGGTGTTCGGCGTGCTGCGTCCGGTGCTCAACAACATTACCGGCGGCGGCAAGAGCAAGCAGTTGGCAGG CCTGGGTGACGTAGAACTGGGCGGCATGGGCGGTCTGGATGGCGAATTGGCTAACGATCGCGTCAGCCTTGGCGGGCCGCAGAGCATTCTGCTGCCAAGC CCGAGCGAAGGCTATGACGCACAGTTGAACGCCATCAAGAGTCTGGTGGCAGAAGATCCGGGTCGTGTGGCCCAGGTCGTGAAAGAGTGGATTAACGCAG
DNA Sequence for Gene
>VM99_RS16665
ATGAGTGATAATCGAGCCGCTGTTGCCAAATTGTCCCGGGTCGACAAAGCCGCGATCCTGCTGCTGTCCCTGGGTTCGACCGACGCTGCCCAGGTGCTGC GCCACATGGGGCCCAAGGAGGTCCAGCGCGTGGGCGTGGCCATGGCGCAGATGGGCAATGTGCATCGCGAGCAGGTTGAACAGGTGATGAGCGAGTTCGT CGACATCGTCGGCGACCAGACCAGCTTGGGCGTCGGCTCCGACGACTACGTGCGCAAGATGCTGACCCAGGCTCTCGGCGAGGACAAGGCCAACGGCCTG ATCGACCGTATCCTGCTGGGTGGCAACACCAGTGGCCTGGACAGCCTCAAGTGGATGGAACCGCGCGCCGTTGCCGACGTGATCCGCTACGAGCACCCGC AGATCCAGGCCATCGTGGTGGCTTACCTCGACCCGGACCAGGCCGGTGAAGTACTGGGCAACTTCGACCACAAGGTGCGCCTGGACATCATCCTGCGGGT GTCCTCGCTCAACACCGTGCAGCCGGCGGCCCTGAAGGAATTGAACCAGATTCTGGAGAAGCAGTTCTCGGGCAACTCCAATGCCTCGCGCACCACCCTG GGTGGTATCAAGCGTGCGGCGGACATCATGAACTTCCTCGACAGCTCGATCGAAGGCCAGCTGATGGACTCGATCCGCGAGTTCGACGAAGACCTGTCCG GCCAGATCGAAGACCTCATGTTCGTGTTCAACAACCTGGCGGACGTCGACGATCGGGGCATCCAGGCGCTGTTGCGCGAAGTGTCTTCCGATGTGCTGGT CCTGGCCCTCAAGGGGTCGGACGAAGGCGTCAAGGAAAAGATTTTCAAGAACATGTCCAAACGGGCGGCGGAACTGTTGCGCGACGACCTCGAGGCCAAG GGCCCGGTGCGCGTCAGCGACGTGGAAACTGCGCAGAAGGAAATCCTTACCATCGCCCGCCGCATGGCCGAAGCCGGAGAGATCGTGCTCGGTGGCAAGG GCGGCGAAGAGATGATCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCGTTATGTCTGCCAAGAGCGATGAGTCACCCAGCGACCTGATCCGCGCCCGGGACGTCGGTGGTTTCGACGTCTGGTCGCTGCCCAGCTTCGATCCC CATGTGCCCGAGCCTGAACCGGAGCCGGTGGAAGAACTGCCGGAAATCGAGGAAGTACCGCTGGAGGAAGTCCAGCCGCTGACCCTTGAGGAAGTCGAGA GCATTCGTCAGGAAGCCTATAACGAAGGCTTTGCCGTCGGCGAGAAGGAAGGCTTCCACAGCACCACCCTCAAGGTTCGCCAGGAAGCCGATGTGGCGCT GACGGCCAAGCTCCGGGCGCTGGAATCGCTGATGGTCAACCTGTTCGAGCCGATCGCCGAACAGGACACCCAGATCGAGAAGTCCCTGGTGGACCTGGTG CAGCATATTTCCCGGCAGGTGATTCAGCGCGAACTGGCCATCGATTCGAGCCAGATCGAGCATGTCATGCGTGAAGCCCTCAAGCTGTTGCCGTTGGGCG
Amino Acid Sequence
>flagellar motor switch protein FliG
MSDNRAAVAKLSRVDKAAILLLSLGSTDAAQVLRHMGPKEVQRVGVAMAQMGNVHREQVEQVMSEFVDIVGDQTSLGVGSDDYVRKMLTQALGEDKANGL IDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLGNFDHKVRLDIILRVSSLNTVQPAALKELNQILEKQFSGNSNASRTTL GGIKRAADIMNFLDSSIEGQLMDSIREFDEDLSGQIEDLMFVFNNLADVDDRGIQALLREVSSDVLVLALKGSDEGVKEKIFKNMSKRAAELLRDDLEAK GPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site