Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS14555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain UFB2, complete genome. [Details]
DNA Sequence Upstream of Gene
GCTCGCCCACGGCCTGTCGGCGGCGGCGCTGTTTATCCTCAGCGGCCAGTTGTACGAGCGCCTGCACACCCGCGACATGCGCGAGATGGGCGGCGTCTGG TCGCGCATCGCCTACCTGCCGGCCATCAGCCTGTTCTTCGCGGCCGCGTCCCTGGGCTTGCCGGGCACCGGCAACTTCGTCGGCGAGTTCCTGATCCTGA TCGGCTCGTTCGTCAGTGCGCCGTGGATCACGGCCATCGCCACGTCCGGCCTGGTGTTCGGTTCGGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGTCCGGCCAAGTCGGATGAAGTGCTGCGCGGCATGGACGCTCGCGAACTGATCATGGTGCTTGGCCTTGCGGTGCTGCTGGTTTACCTCGGCGTTTCC CCGCAACCGTTCCTCGACACCTCTGCCGCCACGATGCATGGCGTGCAGCAGTGGCTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
DNA Sequence for Gene
>VM99_RS14555
ATGGAATTCACGATTCAACACTTTATCGCGCTTGCGCCGCTGTTGATCACCAGCGCCACGATCATCGTGGTGATGCTGGCGATCGCCTGGCGGCGCAATC ACTCACAGACCTTCCTGCTGTCGGTGGCGGGGCTGAACCTGGCCCTGCTGTCGATCCTGCCGGCCCTGAAAGTCGCGCCCCTGGTGGTCACGCCGCTGAT CCAGATCGACAGCTTCGCCTGCCTGTACATGGCGTTGATCCTGGTCGCCACCCTCGCCTGCGTCACCCTCGCCCACGCCTACCTCGGCGATGGCGGTTCG GGTTACCCGGGCAACCGCGAAGAACTGTACCTGCTGATCCTGATGGCCGCCGCCGGTGGCCTGGTCCTGGTCAGCGCGCAGCACCTGGCCAGCCTGTTCA TCGGCCTGGAACTGCTGTCGGTACCGGTCTACGGTCTGGTGGCCTACGCCTTCTTCAACAAGCGCTCCCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCGGCCGGTTCCGCGTTCCTGTTGTTCGGCATGGCGCTGCTCTATGCAGAAGCCGGCACCCTGAGCTTCGTCGGTATCGGCCAGGCCCTGGCGGCCACC GGCCTGCCAAGCCCGATCGCGCAACTGGGCCTGGGCATGATGTTGATCGGCCTGGCGTTCAAGCTGTCGCTGGTGCCCTTCCACCTCTGGACCCCGGACG TCTACGAGGGCGCCCCGGCACCGGTGGCGGCGTTCCTGGCCACCGCGTCGAAAGTGGCGGTGTTCGCGGTGATGGTTCGCCTGTTCCAGATCTCCCCGGT GGCCAGCAGCGGCGTGCTGAACGACGTGCTGACGATCATTGCCATCGTGTCGATCCTGTTCGGTAACCTGCTGGCACTGACCCAGAGCAACCTCAAGCGC CTGCTGGGTTACTCGTCCATCGCCCACTTCGGCTACCTGCTGATCGCGTTGATCGCCAGCAAGGGCCTGGCGGTGGAAGCCATTGGCGTGTACCTGGTCA CCTACGTCATCACCAGCCTCGGCGCGTTCGGCGTGATCACCCTGATGTCCTCGCCATACAACGGCCGCGACGCCGACGCCCTGTACGAATACCGTGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGCATTCCGCTGACCGCCGGCTTCATCGGCAAGTTCTACATC ATCGCCACCGGCGTCGAGGCGCACCAATGGTGGCTGGTCGGCTCCCTGGTGCTGGGCAGTGCCATCGGCGTGTTCTACTACCTGCGCGTCATGGTCACCC TGTACCTGATGGAACCGAACCTGCGTCGCCACGACGCCGAGTTGCACTGGGAGCAGAAGGCAGGCGGCGTGATGCTGCTGGCTATCGCCGTACTGGCGTT CTTCCTGGGCGTGTACCCACAACCGTTGCTGACCCTGGTCCAGCAAGCGGGCCTGGTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCTCGGCAGCACCGCTGTGAAAAAACCCGTATCGCGAGATACGGGTTTTTTTATGGCTGGTTCTGAAGAATGACAAATCGTGGCGAGGGAGCAAGCT CCCTCGCCACGGGCCAGGTGTGTCAACAGGAGCTTTTAGCCGCGCGTCAGCGCAAAGTGCAACGAGCTTTTACCCCGGGTCTTGCAGCTTGCACGAAGCC GGAACTTACCACTCATCCAACTCTTTGTTTTACCTGTACTTTTTTATAAGCGCTGGCTGGCATGGCTGATGCAATTTACCCCATACGCGGCGTCGGCGCT TGAAGCCTACCCGCAACCGTGAATTGCCAGGAGCTACTTATGAACGCCATCGACCTTTTGAAAGCCGACCATGAACGCGTGAAAGCGATTCTGACCCAAC TGAGCGAATCCACTGATCGCGCCATCAAGAAACGCACCGATCTGTTGGCGAAACTGGAAATGGAAGTGACCATCCACACCCGCCTGGAAGAAGAGATCCT
Amino Acid Sequence
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSATIIVVMLAIAWRRNHSQTFLLSVAGLNLALLSILPALKVAPLVVTPLIQIDSFACLYMALILVATLACVTLAHAYLGDGGS GYPGNREELYLLILMAAAGGLVLVSAQHLASLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGTLSFVGIGQALAAT GLPSPIAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPVASSGVLNDVLTIIAIVSILFGNLLALTQSNLKR LLGYSSIAHFGYLLIALIASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYNGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVEAHQWWLVGSLVLGSAIGVFYYLRVMVTLYLMEPNLRRHDAELHWEQKAGGVMLLAIAVLAFFLGVYPQPLLTLVQQAGLVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site