Strain | Pseudomonas chlororaphis strain UFB2, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCCTGCCCACCGTGACCGACATCCTCCAGGAACTGGAGAAACCCGGCCGCGACCCACGTCCTGAATTCAAGACCGCCGAGTTCCAGGAAGGCGTCGAAG ACCTCAAGGACCTGCAACCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGACATCGGCGTGCACCAGGACGGCCT GGTGCACATCTCGGCCCTGTCCGAGAAGTTCATCAAGGACCCGCGCGAGGCCGTGAAAGCCGGTGACGTGGTAAAAGTAAAAGTCATGGAAGTCGACATC CCGCGCAAACGCGTCGGCCTGTCGATGCGCATGAGCGACACCCCGGGCGAGAAAATCGATGGGGCCCGTGGCGCGCGTCCGGGCTCGGCGCCGCGCCAGT CGCAGAACACCGCACCGCGCAAGGAAACCGCCACGGCCGCCCCGGCGAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAATTGAAGAAACGCTG
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DNA Sequence for Gene |
>VM99_RS06740
ATGGACGTGCCGGCCGGGTTGGTGGAAAGCGGGTTTTTCAAACTGCTCGGCTGCCGTCTGCACAGCCTCGGGGACGGCGTGTCGCAGGTCGCCCTGAACC TTGAGCCGCCGTTGCGCAATCGCGGCGGCAAACTGCACGGCGGCGCGCTGTTCAGCCTGGTGGACATTGCCATGGGCCTGGCCTGTTCCAGTGTTCACGG CTTTGACCAGCAGAGCGCGACCATCGAGTGCAAGATCAACTACATTCGCGCCGTCTCCGACGGCGAAGTGATGTGCACCGCCCGGGTCATCCATCCAGGG CGACGCACCCTGGTGGTCGAAGCCGAGGTTACCCAGGGCGACAAGTTGGTCGCAAAAGCGCAAGGCACCTTCGCTGTGCTATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCCCTGTCATCGATTTGGGTTAATTTCGGCGCTGCAAATGCGGCGACGAAATCCCCTTGTGGGAGCGAGCTTGCTCGCGATAGCGACGGATCAGTCACC TGAGTGTTGACTGACACTGCCCTATCGCGAGCAAGCTCGCTCCCACAGGACATTGCGGTGATCAGTCCATGACAGCATAAAAACCAGGCGAAAACGCCAG TTTTAACTTCACCCTTGTAGACCGTCTTGCCCACCCCCATATTGGGGCGACTGACGCGTGAAGGAATTCAACTTGAGCGACCTTTTAAACCGCCGCCTGG CCCTGCTCGGCGAGCGCGCCAACCTCTCCCTGCTCGAACAGTGCCTGCATGGCATCGAGCGTGAATGCCTGCGCGTCACGGAGAACGGGCACCTGGCCCA AACCCCGCATCCCGAGGCGTTGGGGTCGGCGCTGACCAACGAACAGATCACCACCGACTATTCCGAGTCGCTGCTGGAGTTCATCACCCCGGCATTGGCC
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Amino Acid Sequence |
>hypothetical protein
MDVPAGLVESGFFKLLGCRLHSLGDGVSQVALNLEPPLRNRGGKLHGGALFSLVDIAMGLACSSVHGFDQQSATIECKINYIRAVSDGEVMCTARVIHPG RRTLVVEAEVTQGDKLVAKAQGTFAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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