Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS02020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00498
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49879 | SMAD/FHA domain | IPR008984 | SMAD/FHA domain superfamily | 14 | 117 | 1.74E-23 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 175 | 199 | - |
| Gene3D | G3DSA:2.60.200.20 | - | - | - | 6 | 113 | 3.7E-21 |
| SMART | SM00240 | FHA_2 | IPR000253 | Forkhead-associated (FHA) domain | 27 | 78 | 9.7E-5 |
| CDD | cd00060 | FHA | - | - | 15 | 102 | 5.80133E-20 |
| Pfam | PF20232 | C-terminal domain of Type VI secretion system FHA protein | IPR046883 | Type VI secretion system, FHA domain-containing protein, C-terminal domain | 306 | 484 | 7.9E-65 |
| Coils | Coil | Coil | - | - | 310 | 330 | - |
| NCBIfam | TIGR03354 | JCVI: type VI secretion system-associated FHA domain protein TagH | IPR017735 | Type VI secretion system, FHA domain-containing protein | 3 | 486 | 5.6E-130 |
| Pfam | PF00498 | FHA domain | IPR000253 | Forkhead-associated (FHA) domain | 30 | 97 | 5.0E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.