Pseudomonas chlororaphis PCL1606, PCL1606_RS29530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGAAAGTCAGCACCCCGATCAGCGCCGACGATACCGGCGGCAGCCTGCATGACCGCCTCGCCGAAATCGGCCCGCCCGCCGTGGTGCAGGCCACCGCCG GCCTCGCCGCGGGAACCCTGCAAGGCGAAGTGCAGGACGACAGCCTCGCCACCTACGCCCACAAGCTGAACAAGGACGAAGCGCGGATCGACTGGAGCCG CCCGGCGCTGGAACTGGAGCGCCTGATACGCGCCTTCAACCCCTGGCCGATCTGCCACAGCACCCTGAACGGCGAGGCCCTGAAGGTGCTGGCCGCCCAC CTCGCCGAAGGCCGGGGCATACCGGGGACCATCCTCGGCGCCAGCAAGGACGGCCTGCTGGTCGCCTGCGGCGAGCAGGCGCTGTGCCTGACCCGCCTGC AATTGCCCGGCGGCAAGGCGCTGAACTTCAGCGACCTGTTCAACAGCCGGCGCGAGAAGTTCGCCACCGGCACCGTGCTCGGCCAAGCGGCGGACGCCCA
DNA Sequence for Gene
>PCL1606_RS29530
ATGAACCCGCGCCTGGCCGCTGCCAAGGCCCTGACTTCGGTCCTCACCGGCAAAGCCTCGCTCAACAGCTCGTTGCCGACCCTGCTGGACAAGGTCGAAG CGCGCGATCGCGGCCTCACCCAGGACCTGGCCTTCGGCACCGCGCGCTGGCAGCCCCGGCTGGCGGCGCTGGCGGCCAAGCTGCTGCAGAAGCCGTTCAA GGCGGCCGACGCCGACGTCGAGGCGCTGCTGCTGGTGGGCCTCTACCAGTTGCTCTACACCCGCGTCCCCGCGCATGCCGCCATCGGCGAGACCGTGGGT TGCGCCGACAAGCTGAAAAAGCCCTGGGCCAAGGCCCTGATCAATGCCGTGCTGCGCCGCGCCCAACGCGAGAGCGAGGCGTTGTTCGCCGAACTGGAGC GCGACCCGGTAGTACGCACCGCCCATCCGCGCTGGCTGCAGAAGTCCCTCAAGGCGTTCTGGCCCGAGCAATGGGAAGCCATCTGCGCCGCCAACAACGC CCACCCGCCGATGATCCTGCGGGTCAACCGGCGCCATCATGCCCGCGACGCCTACCTGCAACTGTTGGCCGACGCCGGCGTCGCCGCCACGCCTTGCGTC TACAGCCAGGACGGCATCGTGCTCGCTGAAGCAACCGACGTGCGCAACCTGCCGGGGTTCGCAGAAGGCTGGATCAGCGTGCAGGACGAAGCTGCGCAAC TGGCCGCCGAGCTGCTGGAGCTGGCGCCAGGACAAAGGGTGCTCGACGCCTGCTGCGCGCCTGGCGGCAAGACCTGCCACATCCTCGAAGTCCAGCCCGC GCTGGCCGGCGTGGTGGCGGTGGACCTGGAAGCCAAACGCCTGGTGCGCGTGCGGGAGAACCTCGACCGCCTGGGCCTGGACGCCGAACTGATCGCCGCC GACGGCCGCGATACCGCCGCGTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTGCTCGACGCGCCGTGTTCGGCCACCGGGGTGATCCGTCGCCACCCGG ACATCAAGCTCACCCGCCAGGCAGACGACATCGCCGCCCTGGCCACCCTGCAAGGCGAACTGCTGGACGCCATGTGGTCGACCCTGGAAGTCGGCGGCAT CCTGCTGTACGCCACGTGCTCGACCCTGCCGACCGAAAACACCGAGGTGATCGAGGCCTTCCTGGGCCGTACCCCGGGGGCTCGCGAGCTGGACATTGCC GGGCAACTGGGGCAGCCTGCGGCCGGCTTGAAGCAGCCCCACGGGCGCCAGTTGCTGGCGCAAGAGGGCGGCCACGACGGGTTCTACTACGCCAAGCTGA TCAAGATCGCCGCAGCACGCGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGGTTTTAAGGGAGTGACTGGATGAAAATCATCATCCTCGGCGCCGGGCAGGTGGGCGGTTCCCTGGCAGAGCATCTGGCCAGCGAAGCCAACGACATC ACAGTGGTGGATACCGACGGCGATCGCCTGCGCGACCTCGGCGACCGCCTGGACATCCGTACCGTGCAGGGCCGCGCATCGTTCCCAACGGTGCTGCGCC AGGCCGGCGCCGACGATGCCGACATGCTGGTCGCGGTGACCAACAGCGACGAAACCAACATGGTCGCCTGCCAGGTCGCCCACACCCTGTTCCACACCCC GACCAAGATCGCCCGGGTCCGCGAAGCGGCCTACCTGACCCGCGCCGGCCTGTTCGACAACGAAGCGATTCCGGTCGACGTGCTGATCAGCCCCGAGCAG GTGGTGACCAACTACATCAAGCGCCTGATCGAACACCCCGGCGCCCTGCAAGTGATCGACTTCGCCGAAGGCAAGGCCCAGCTGGTGGCGGTCAAGGCCT
Amino Acid Sequence
>16S rRNA methyltransferase
MNPRLAAAKALTSVLTGKASLNSSLPTLLDKVEARDRGLTQDLAFGTARWQPRLAALAAKLLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVG CADKLKKPWAKALINAVLRRAQRESEALFAELERDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHARDAYLQLLADAGVAATPCV YSQDGIVLAEATDVRNLPGFAEGWISVQDEAAQLAAELLELAPGQRVLDACCAPGGKTCHILEVQPALAGVVAVDLEAKRLVRVRENLDRLGLDAELIAA DGRDTAAWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIAALATLQGELLDAMWSTLEVGGILLYATCSTLPTENTEVIEAFLGRTPGARELDIA GQLGQPAAGLKQPHGRQLLAQEGGHDGFYYAKLIKIAAARG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site