Pseudomonas chlororaphis PCL1606, PCL1606_RS23195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGTTCCTGTGCCTGGCGGCGCTGTATGAAAGCTGGTCGATTCCGATCGCGGTCATGCTGGTGGTGCCATTGGGGATCATCGGTGCGCTGCTGGCCACCA GCCTGCGCGGCTTGTCCAACGACGTGTACTTCCAGGTGGGTCTGCTGGTGACCATCGGTCTGGCGGCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAA GGAACTGCACGAACAGGGCCGCAGCCTGATCGATGCGGCGATCGAAGCCTGCCGCATGCGTCTGCGCCCGATCATCATGACCTCCCTGGCCTTCGTGCTC GGTGTGGTGCCCCTGGCGATCTCCACCGGCGCAGGCTCGGGCAGCCAGCATGCGATCGGTACCGGCGTGATTGGCGGTATGCTCACCGCAACCGTTCTGG CGATATTCTGGGTGCCTCTGTTCTTCGTGACCGTGTCCTCGATGGGCCGCCGTAACGTCGACGAACCAGAAACCACTGAAACTCCTAAAGAGGCTGGCCA
DNA Sequence for Gene
>PCL1606_RS23195
ATGAGCAAGTCGCTACTCTCCCTCGCAATCACCGCCGCCGTGCTGAGTGGTTGCTCGCTGATACCCGATTATCAGCAGCCGCAGACCCCGGTCGCGGCGC AGTACCCGCAAGGTCCGGCCTATTCGCCGGCCCAGGCGCCGGCCCAGGCCGCCGCCGAGCAGGGCTGGAAGCAGTTCTTCCGCGACCCTGCCCTGCAGCA GCTGATCCAGGTTTCCCTGGAAAACAACCGCGACCTGCGGGTCGCGGCCCTGAACATCGACGCTTACGCGGCTCAGTACCGCATCCAGCGCGCCGACCTG TTCCCGGCGGTCTCGGCCAATGCCAGCGGCAGCCGCCAGCGTACGCCGGCCCGGATGTCGCAGACCGGCGAGGCCGCCATTGCCAGCCAGTACTCGGCGA CCGTCGGCATCAGTGCCTACGAACTCGACCTGTTCGGTCGGGTTCGCAGCCTGAGCGAACAAGCGCTGCAACAATACTTCGCTACCGAAGAAGCGCGTCG CAGCACCCAGATCAGCCTGGTGGCCAGCGTGGCCAATGCCTACCTGACCTGGCAGGCCGATAAAGAGCTGCTGAAGCTGACTCAGGAAACCCTCGGTGCC TACGAGGAAAGCTACAAGCTGACCAGCCGCAGCAATGAAGTCGGGGTCGCCTCGGCGCTGGACCTGGCGCAATCGCGTACCTCGGTGGAAAACGCCCGGG CGCAATTGGCGCGCTACACCCGCCAGGTCGCCCAGGACGAAAACAGCCTGACCCTGCTGCTCGGCACCGGCATCCCGGCCAACCTGCAAGCGGCCAAGCC GCTGTCGGACGACCTGCTCGCCGACGTGCCGGCCGGCCTGCCGTCCGACCTGCTGCAACGTCGTCCGGACATTCTCCAGGCCGAGTACAACCTGAAGGCG GCCAACGCCAACATCGGCGCGGCCCGCGCGGCGTTCTTCCCGAGCATCAGCCTGACCGCCAACGCGGGTAGCCTGAGCCCGGACCTGTCCGGCCTGTTCA AGGGCGGTTCGGGCACCTGGCTGTTCCAGCCGCAGATCAACCTGCCGATCTTCAACGCCGGCAGCCTGCGCGCCAGCCTCGACTACGCCAAGATCCAGAA GGACATCGGCGTGGCGAACTACGAGAAGTCCATCCAGACGGCCTTCCAGGAAGTCGCCGACGGCCTGGCCGCACGCCAGACCTACACCGAGCAGTTGCAG GCCCAACGCGACTTCGTCAACGCCAACCAGGACTACTACCGCCTGGCCGAGCGTCGCTACCGGATCGGGGTCGACAGCAACCTGACCTTCCTCGATGCGC AGCGCCAGCTGTTCAGCGCCCAACAGGCGCTGATCACCGATCGCCTCGCGCAGCTGACCAGCGCGGTCAACCTGTACAAGGCGCTGGGTGGCGGCTGGAA CGAGCAGACGGCGCAATACGCGCCGCTGAAAGAAGAAGCGCCCAAGCTGAAACTGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCAGCGTGACAACAAAAAGCCCACCCTCTGGTGGGCTTTTTGCTGGCCTCGAATCACTACGGGATAACTACGGGATTTACCTGAAAATCCCTTGGGGC CATCCCCGCGCAGAGTGCGGCGATTAACGTTCGATAATCGCCCATAACCCTGCTCAGCCCGATTGAATCGGCGCGCCGATCCCCCGCACCATTGCCCGCA CCGCCAAAACCAATAACAACAGGTTCGCCCCCATGGCCACACGCCCTACCCTCCCCAGCTGACCCCAGCCGTTCGCTTACCCGGATTTTTTTGTCTGCAA CCCCAGGTTGCGGCTGCGTATCGCTGCACCTCCAACAATTAGAGAGTCCCGAGTCCATGAAAGCGTCCACCGCGCCCTATGTATTTCCCAGTCTGATCGC CCTGGCCCTGGCCGGCGCGACCTTGCCCGTGGCGGCCGAAGAAAGCGGTTTTCTCGAAGACGCCAAGGCCAACCTGAACCTGCGCAACTTCTACATCAAC
Amino Acid Sequence
>adeC/adeK/oprM family multidrug efflux complex outer membrane factor
MSKSLLSLAITAAVLSGCSLIPDYQQPQTPVAAQYPQGPAYSPAQAPAQAAAEQGWKQFFRDPALQQLIQVSLENNRDLRVAALNIDAYAAQYRIQRADL FPAVSANASGSRQRTPARMSQTGEAAIASQYSATVGISAYELDLFGRVRSLSEQALQQYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQETLGA YEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLARYTRQVAQDENSLTLLLGTGIPANLQAAKPLSDDLLADVPAGLPSDLLQRRPDILQAEYNLKA ANANIGAARAAFFPSISLTANAGSLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASLDYAKIQKDIGVANYEKSIQTAFQEVADGLAARQTYTEQLQ AQRDFVNANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQALITDRLAQLTSAVNLYKALGGGWNEQTAQYAPLKEEAPKLKLF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site