Pseudomonas chlororaphis PCL1606, PCL1606_RS22665

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
AAGTTTCCTATATGTTGTTCAATATTCTTCTCCCTGTATTTAATGTCGCGTACTGGAATAAGTGACTGTGTGAGTAGGGTATTCGTTGGCCATGATGGAG ACTCCTTTCTTCTTTGATGTCATTGACAGCTATTAAGGGTGGACAGACTACTGCAACACAGTTGCCGCAATGCAGTCGAACACCATGGCTTGAAGAAGTA CACAGTCTTGCATCATATGTAAAGACGAAATCAGCGCCGAGTTCATTAAGATTTTTCTGATGGGCGGATCGGCCATCTCTCAATTCAAATTCAAAGATTA GTCGGTAAGGTACGACCTCCTTTGGTGACCTGTGACAAGGCTGCCAAAGGGCTCGCTATTGTTGTCGATTAGTCGACTCAGACTTTGAATGAGAGAGGCT TTGGTTGTTCTGGGCGAACTATTTCGCTCATGGATGAACCAGGAAGGTGATCAAGCTGGACTGCACTTTCTCTGCCAATCAACGTGAACAAGGAAATCAC
DNA Sequence for Gene
>PCL1606_RS22665
ATGAAAAGAACATCCTTTGTATCCCTGGCAACTTCAAGCTTGATGCTTGCCGCACTGATTCCGTCGATGTCTCACGCCACCGACGGTGTGATCAACTTCT CCGGCAGCATCAGTGATGTGACTTGCAACATCAACGGCAAGGCGCCGGGTGAAGACAACGTTACCAACGTCGAGTTGGGACGTATTGCCCCTTCGGCCTT TACCGCGGTTGGGACTGCCTCGACGTTCAAGAACTTCGACCTGGTGCTGTCCGGTGCGCAATGTACCGACAAGACCAAAGTCGTGGTTGATTTCGACCAG GTAGGTAACGTCGATCCGGCGACTGGCAACCTCAAGCTGATCGGTAGCGCGCCAGCAACGGGCGTACAGATCCAGGTCTACAACGCCGACGCTACTGCCG CGAAGATCCCGCTGGGCCAGGCAGAAACCTCGCCGCAGGTCGCTACGGTTGCGGGTAACACCGCCACGCTGAAGTTCAAGGCGAGCTACGTCTCGACTTT GGCGACTGTCGGCGCGGGTTCGGGTAACTCCTACGTTCGCTACACCCTGTCGTACAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCAAGGCCGAAGGAGTGTGTCATGACGCCGAAAGCGCGTGTTTGGTCTTCTCTCGTTCTCGGCGTCATGTTTCTGGGCGTATGGTCTGGAAGCGTGCA GGCGTCGATCGTCATTCAAGGCACCCGGCTGGTTTATCCCGCGGATGCCCGGGAAGTAACCATCAAGATCAATAATGTGGGCGGTACGGCCTTACTGGCA CAGAACTGGATCGACGACGGTGACTCCCATAAAAAACCTGAGGAAATAAAAGTTCCATTCCTGCTGTCTCCAGCGGTTATTCGGCTGGACCCGGAAAGTT CTGCATCGCTGCGTGTCTCTTATACAGGGGAGAAACTTGCCGAGGATCGAGAGTCATTGTTCTGGCTCAATGTCCTGGAAACACCTCCGCGCAAAGAGGC CGATGAAAACGTTTTGCAGTTTGCCTTCAGGACCCGGATAAAAGTGTTCTTTCGTCCGAAGAACTTGAAGTCGGATGTCGATCTAGTGGCGGACAAGCTG
Amino Acid Sequence
>fimbrial protein
MKRTSFVSLATSSLMLAALIPSMSHATDGVINFSGSISDVTCNINGKAPGEDNVTNVELGRIAPSAFTAVGTASTFKNFDLVLSGAQCTDKTKVVVDFDQ VGNVDPATGNLKLIGSAPATGVQIQVYNADATAAKIPLGQAETSPQVATVAGNTATLKFKASYVSTLATVGAGSGNSYVRYTLSYK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site