Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGCTGATGCTCACCGCGCGCAACGACGAGACCGACCGCATCATCGGCCTGGAGATGGGCGCCGACGATTACCTGGTCAAGCCCTTCGCCGCCCGCGAGC TGCTGGCGCGGATCAATGCCGTGCTGCGGCGCACGCGCATGCTGCCGCCGAACCTGGTGGTCAGCGAAAGCGGTCGCCTGCTCGGCTTCGGCCGCTGGCG CCTGGACACCACCGCGCGCCACCTGCTGGACCAGGACGGCACCCTGGTCGCCCTCAGCGGTGCCGAATACCGCCTGCTGCGGGTGTTCCTCGACCACCCG CAGCGGGTGCTCAACCGCGACCAGTTGCTCAACCTGACCCAGGGCCGCGACGCCGACCTGTTCGACCGCTCCATCGACCTGCTGGTCAGCCGCCTGCGCC AGCGCCTGCTGGACGACGCCCGCGAGCCGGCCTACATCAAGACCGTGCGCAGCGAGGGTTATGTGTTCTCGCTGCCGGTGGAAATCCTCGAGGCCGCCTC
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DNA Sequence for Gene |
>PCL1606_RS16575
GTGAAGCTGGCGCTGCACTGGCCACGGACCCTCGCCTCGCGGCTGTCGCTGATCTTCCTGATCGGCCTGGCGCTGGCCCAGGGCCTGTCGTTCGCCGCGC AATCCTACGAGCGCTACCAGAGCGCCAGGACGGCCATGCTCGGCAACCTGGAAAGCGATGTCGCGACCTCCGTCGCCATCCTCGACCGCCTGCCCGCCGC CGAACGCGACGCCTGGCTGCCGCGCCTGCAACGGCGCACCTATGGCTACCGGCTCGATGCCGGCGAACCCGGCCAGCCCATGGGCCGCGACGACGTGCCG GTCTCGGTGAACTCGATCAAGACCGCCCTGGGCGCGGACTACGAGCTGGCGTTCAACACCATTCCCGGCCCGCGCCAGCACTATCAGGCCCACCTGCGCC TGGCCGACGGCATCCCGCTGACCATCGATGTGCGCCCGGCGATGATGCCGATGTCGCCCTGGCTGCCGGTGGTGCTGCTGGGGCAATTGCTGCTGTTGAT CCTCTGCGCCTGGCTGGCGGTGCGGGTCGCGGTGCGCCCGCTGACCCGGCTGGCCCAGGCGGTGGACAGCCTCGACCCCAACACCCACGGCGTGCCGCTG GACGAAAAGGGCCCGCTCGAAGTGGCGCACGCGGCCCGGGCCTTCAACGCCATGCAGGCGCGGATCGGCGCCTACCTCAAGGAGCGCATGCAACTGCTGG CGGCGATCTCCCATGACCTGCAGACGCCGATCACCCGCATGAAGCTGCGCGCCGAGTTCATGGACGACTCCAGCGAGAAAGACAAACTGTGGAGCGATCT GAGCGAAATGGAGCACCTGGTGCGCGAAGGCGTGGCTTATGCCCGCAGCATCCACGGTGCCACCGAGGCCAGTTGCCGGATCGCCCTGGACGCGTTCCTC GACAGCCTGGTGTTCGACTACCAGGACACCGGCCAGGACGTCGAACTGGCGGGCAAGAACGGCGCGCTGATCGACACCCGCCCCCATGCCCTGCGCCGGG TGCTGGTGAACCTGGTGGACAACGCGCTGAAGTTTTCCGGCGCGGCGCGGATCGAGGTCCAGGCCCTGGCCGGCGATCGCCTGTCGATCAAGGTCCTGGA CCGCGGCCCGGGGATCAGCGAAGCGCAACTGGCCGAAGTGCTCAAGCCGTTCTACCGGGTGGAAAGCTCACGCAACCGCGATACCGGCGGCACCGGCCTG GGCCTGGCCATCGCCCAGCAACTGGCGGTGGCCCTGGGCGGCTCGCTGCACCTGAGCAATCGCCAGGGCGGTGGCCTGTGCGCCGAGCTGATCCTGGTCG GCGGCGGCCCGGCCCGCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCTCGCTACACAGGCATACATAACCGGCCCTCGCCGACACAGCCGGTATACATGGCCTTGCAAGACTCCCGGGACGCGCCGCAGCGGCGGCGCCCAA CCCCAGGAGCCCGTAATGACCACCCACACCTTCCCCTCGCCATGGCATGGCTGGCGGCTGTTCAGCCTGCTGGCCGCCGCCGTGCTGCTGATGACCGCGC TGATCCTGCTGCTCGGCCCGGACGCGGTCGACGCCACCCGCAGCGCCATCCGCGCCACCGCGCGCTCATCCTTCGTGCTGTTCCTGCTGGCCTTCCTGGC TTCGGCCTGGGCCGTGCTGCTGCCCTCGCCCCTGGGCCAGGCGCTGCTGCGCGAACGGCGCTTCATCGGCCTGGCCTTCGCCTTCTCGCACCTGGTGCAC GCACTGCTGATCTACCGCTACGGCCAGTTGAACCCGCAGTTCTGGCCCGGCCGCAGTGCCCTGGGCAACCTGCCCGGGTCGGTCGGCTACCTGTTCATCC
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Amino Acid Sequence |
>ATPase
MKLALHWPRTLASRLSLIFLIGLALAQGLSFAAQSYERYQSARTAMLGNLESDVATSVAILDRLPAAERDAWLPRLQRRTYGYRLDAGEPGQPMGRDDVP VSVNSIKTALGADYELAFNTIPGPRQHYQAHLRLADGIPLTIDVRPAMMPMSPWLPVVLLGQLLLLILCAWLAVRVAVRPLTRLAQAVDSLDPNTHGVPL DEKGPLEVAHAARAFNAMQARIGAYLKERMQLLAAISHDLQTPITRMKLRAEFMDDSSEKDKLWSDLSEMEHLVREGVAYARSIHGATEASCRIALDAFL DSLVFDYQDTGQDVELAGKNGALIDTRPHALRRVLVNLVDNALKFSGAARIEVQALAGDRLSIKVLDRGPGISEAQLAEVLKPFYRVESSRNRDTGGTGL GLAIAQQLAVALGGSLHLSNRQGGGLCAELILVGGGPARL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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