Pseudomonas chlororaphis PCL1606, PCL1606_RS15950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
TCGCTGGTGTTGCTGCGTCCGCAGATCGATGCCTTGCTCGACCAGCACCGCGACGTTCTCCAGAGCCTGGACGGCGAGCCCGGCATGCTCATCGCGCCGC GCACGGTGATGCACATCCTGCTGTTGCAGCTGCTGTATTCGGTGCCCGGCGAGCAGCAGCTGTACGAGCAGCTCAATTACAACCTGCTGTTCCGCTGGTT CGTCGGCCTGGACCTGAACCAGAAGGTCTGGAACCTCGGCGTCCTGAGCCGGGACATCGCCACGCTGCTGGGCGATGCGCGGGCGGTACAACTGATCCAG AAAATCATCGGTGAAGTGTTCTGTGGCGCCTTGCTGCACATGCCCGAGTTCTCCCTGAACTTCGCGCTGCTGCACAGCTGGCTGGCCAAGCACGCCACGA CATCGACCTTGAGCAATTGATCCGGCCAAACGCCGTACAGACGGCGACGGCGGCGACGCGGTTCGACATTCTTGGAAATCTAGGGGGCGGTGTGGAGCAT
DNA Sequence for Gene
>PCL1606_RS15950
CTGTTCAAGAGAGGGCGGCCGGGGCCGACCAGGCGCTGGCTGCCGGTGTGCGGCTGGCTGGCGCTGGCCGCGGCGAGCCTGCCGGCGTCGGCCGAGGAGG GCGGCCCGGCGGACGGCGAGCCGGTGCCCGGCAGCGCAACGGCTGCGCGGTTGGTGGACGTGAACGAGTATTTCGTGCGCGGCAATACCGTGCTCGATGC CCGGGCGATCGAAGAAGCGGTGTATCCCTACCTCGGCCCGCAAAAAGCCCTGAGCGATATCGAAGGCGCCCGCGACGCCTTGCAGAAGGTCTACCAGGCG CGTGGCTATCAGTCGGTGTTCGTCGAGCTGCCCGAGCAGAAGGTCGAGGACGGCATCGTCTACCTGCAGGTCAGCGAGACCAAGGTCGGCCGGGTGCGGG TGGTCGGCGCCAAGCATTATTCGCCGGTGGAGATCCGCGACGAGGTGCCGGCGCTCAAGGAAGGCGAAGTGCCGGACTTCGCCAAGGTCCAGGGCCAGCT GGCGGGCCTGAACAAGACGCCCGGGCGCCAGGTCATGCCCCTGGTGCGCGAGGGCCAGCGCCCCGGCACCATGGATGTCGACCTGCAGGTCGAAGACCAG AACCCCTGGCAGGCCAGCATCGGCCTGAACAACGACTACAGCGCCGACACCAAGCACCTGCGGGCGGTGACCAGCCTGGGCTACAACAACCTGTGGCAAC TGGGCCACAGCATTTCCCTGACCTACTTCACCGCGCCCGAGGACCAGGACAACGCCAAGGTCTGGTCTGGTTCCTACACCGCGCCGCTGAACGAGCGCTG GAGCCTGCAGTTCGCCGGCTACCAGTCCGATAGCGACGTCGCCACCATCGGCGGCAGCAATGTGCTGGGCAAGGGCCATTCCTACGGCCTGTCGCTGATC TACAGCCTGCCGGCGAGCGGCAGCTGGGCCAACTCGTTCTCGTTCGGGGTGGACTTCAAGGACTTCGAGGAAGAGCTGAGCCTGGGCGGCGAACGCAACA AGGTGCCGCTCAAGTACGCGCCGTTCACCTTCGCCTACAACGGCTTCCGTTATACCGAGACCTCCCAGCTGGGCCTGGGCCTGAGCCTGGTGGCCGGCAC CCGAAGCCTGTTCGGCTACAGCAGTTCGGACGAAGACTTCGACAACAAGCGCTACCGCGCCAACCCCAGCTTCGCCGTGCTCAAGGGCGACGCGAGTTAC ACCTACACCTTCGCCAACGACTGGCAGAGCGCGTCCAAGGCGGCGTTCCAGCTGGCCTCGGGGCCGCTGGTGTCCAACGAGCAATTCTCCGCCGGCGGCG CCACCTCGGTGCGCGGCTACCTGGCGGCCGAGCGCACCAGCGACGACGGCTTGCTGTTTTCCCAGGAGCTGCGCACGCCATCCCTGGCCAGGTTCCTCGG CGGCTATGTCAACGAATGGCGCTTCTACGCCTTCGCCGAAGGCGCGCGCATGTCCCTGCGCGACGAGCTTCCCGACCAGGAGGCCGACTACAGCCTGGCC AGCGTCGGCCTGGGCACCCGCGCCAGCTTGAGCAAATGGCTTTCCGGCAGCCTGGACTGGGGGTACCCGCTGCTTGACGGACCGAACACCCAGAAACAGG ACTCGCGCCTGCACTTCAGCGTACAGGCGACGTTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTCTCACGGAGTAACTTTCATGCAGCGCTTACTGATTTCCCTGTTGATCTGCCTGGGCTTCGTGCTCCCGGCGACCGCCCAGGCGTGGTGGCAGGATGA CTGGCACTACCGCAAGCAGATCTCGATCGACACCACGCCCCAAGGCGCGGCCATCAACCAGGCCCTGGGCCGCACCGCGCTGCTGGTGCGCCTGCACACC GGCAATTTCAGTTTCGACGGGGTCAAGGAAGACGGCTCCGACCTGCGTTTCGTCAGCGCCGACGACAAGACCGTGTTCAACCACCAGATCGAAAGCTTCG ACCCGCTGATGGGCATGGCCCTGGTCTGGGTCGACGTGCCGAACGTGGAGGGCGGCCAGCGCCAGGATATCTGGATGTACTACGGCAACCAGAAAGCTCC GGCCAGCGCCAACGGCCAGTTGACCTTCGACCCGAACTACATCGGCCTCTATCACTTCGACGGCGCCAACGGCACGCCGGCCAAGGACACCACGGCCTAC
Amino Acid Sequence
>membrane protein
MFKRGRPGPTRRWLPVCGWLALAAASLPASAEEGGPADGEPVPGSATAARLVDVNEYFVRGNTVLDARAIEEAVYPYLGPQKALSDIEGARDALQKVYQA RGYQSVFVELPEQKVEDGIVYLQVSETKVGRVRVVGAKHYSPVEIRDEVPALKEGEVPDFAKVQGQLAGLNKTPGRQVMPLVREGQRPGTMDVDLQVEDQ NPWQASIGLNNDYSADTKHLRAVTSLGYNNLWQLGHSISLTYFTAPEDQDNAKVWSGSYTAPLNERWSLQFAGYQSDSDVATIGGSNVLGKGHSYGLSLI YSLPASGSWANSFSFGVDFKDFEEELSLGGERNKVPLKYAPFTFAYNGFRYTETSQLGLGLSLVAGTRSLFGYSSSDEDFDNKRYRANPSFAVLKGDASY TYTFANDWQSASKAAFQLASGPLVSNEQFSAGGATSVRGYLAAERTSDDGLLFSQELRTPSLARFLGGYVNEWRFYAFAEGARMSLRDELPDQEADYSLA SVGLGTRASLSKWLSGSLDWGYPLLDGPNTQKQDSRLHFSVQATF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site