Pseudomonas chlororaphis PCL1606, PCL1606_RS15835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGGTGCTGGGCGTGCTGTACGAAAGCTATATCCACCCGTTGACCATCCTGTCGACCCTGCCGTCGGCCGGGGTCGGCGCCTTGCTGTCGATCTATGTCC TGGGCGGCGAATTCAGCCTGATCTCGCTGTTGGGGCTGTTCCTGCTGATCGGCGTGGTGAAGAAGAACGCGATCCTGATGATCGACCTGGCGTTGCAACT GGAGCGGCACCAGGGCATGGGCCCGCTGGAGTCGATCCGCAGCGCCTGCCTGCTGCGCCTGCGGCCGATCCTGATGACCACCCTGGCGGCGATCCTCGGC GCCTTGCCGTTGCTGCTGGGCAGCGCCGAAGGCGCGGAAATGCGCCAGCCGCTAGGCCTGACCATCATCGGCGGCCTGGTCTTCAGCCAGATCCTGACCC TTTACACCACCCCGGTGGTCTACCTCTATCTCGATCGCTTGCGCCATGCATTCAACCGCTGGCGTGGGGTTCGTACCGATGCCGCTCTGGAAACGCCGCT
DNA Sequence for Gene
>PCL1606_RS15835
ATGACTGACTGTTCGCCTCGCCACTTTCCCCAGTGCCTGGCCCTGGCCCGCGGTTCGCGGCTGCTGAGCCTGGGCTTGAGCCTGACGCTGCTCAGTGCCT GCGCCATCGGCCCGGACTACCAGCGCCCGCAGGTCGCGGAACCTGAGCATTACAAGGAAGCCGCGGGCTGGCGCCAGGCCAACCCCAGCGATGCCCTGGC GCGTGGCGCCTGGTGGGAGCTGTACGGCGATGCCCAGCTCAACGGCCTGGTCGACAGGCTCAACAGCGCCAACCAGAGCGTGGCCCAGGCCGAGGCGCAG TACCGCCAGGCCCAGGCTCTGGCGCGCAGCGCCCGTGGTGCGTTGTTCCCCACGGTCGACCTGAGCGCCGGCAAGACCCGCGCCAGCCAGGGCACCGGCA GCAGCAATTCGGCGTTGAGCAGCTCGTCCAGCGGGATCCGCGACACCTACAACACCCAGCTCGGCGTGAGCTGGGAGGCCGATGTCTGGGGCAAGCTGCG CCGCAGCCTGGAAGCCAACGAGGCCAGCGCCGAGGCCAGCTTCGCCGACCTGGCGGCGATGCGCCTGAGCCAGCAGTCCGAGTTGGTGCAGAACTACCTG CAACTGCGGGTGATGGACCAGCAGAAGCGCCTGCTCGAAGCCACGGTGGCGGCTTACCAGCGTTCGTTGACCATGACCGAGAACCAGTACCGCGCCGGCG TCGCCGGCCGGGATGCCGTCGCCCAGGCGCGGACCCAGCTGAAAAGCACCCAGGCCGACCTGATCGACCTGATCTGGCAGCGCGCCCAGCTGGAAAACGC CATCGCGGTGCTGATCGGCCTGCCACCGGCCGAGTTCAGCCTGGCCGAGACCCAGGACATCCCGACCTTGCCCCAGGTGCCGCTGGGCTTGCCGTCGCAG TTGCTGGAACGGCGTCCGGACATCGCTTCGGCCGAACGTTCGGTGATCTCCGCCAATGCCAATATCGGCGTGGCCAAGGCCGCCTATTACCCGGACCTGA CCCTGAGCCTGGCGGGCGGCTACAGCAGCAGTACCTACGCCGACTGGATCAGCCTGCCGAACCGTTTCTGGTCGGTGGGGCCGAAACTGGCCATGACCCT GTTCGACGGTGGCCAGCGCTCGGCGGAAGTCGATCGCACCGAGGCGGTCTATGACCAGACCGTAGCCAAGTACCGGCAGACCGTGCTCGACGGTTTCCGC GAGGTGGAAAACTACCTGGTGCAGCTCAAGGTCCTGGCCGACGAGGCCGTGGTCCGCCAGGAAGCGCTGGACGCCGCGCGCGATTCCCAGCGCCTGACCG AGAACCAGTACAAGGCCGGGCTGGTGGCCTACCTGGACGTGGTGACGGTGCAGGCCACGGCGTTGAGCAACGAACGCAGCGTGCTGACCCTGTTGCAGAG CCAGCTGGTGACCAGCGTCCAACTGATCGCCGCCCTCGGCGGCGGCTGGGACGGCCAGCTCCAGGCCAGCACCAACCCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGGCACACCCGTTGCGCCCGACGCCGCATCGAGGCCCACCACGATTCCCGTAGCCGCTGCCGAGCGCCAGCGAGGCTGCGATCGGCAACGCAGTTGCCG CCAAGCCTGACGCCGCGGTGTGTCAGGTGGAATGCGTTGGCCGGGTTTGCGCCTGCTTTGTCGGAGTGCCGCCCAAGTCGATCGCAGCCTCGCCGGGGCT CGGCAGCGGCTACAAATGCGCCGGACGACACACCGAGGCTCGCCACGATTCCGTAGCCGCTGCCGAGCACCAGCGAGGCTGCGATCGGCAACGCAGTTGC CGCTAAACCGGACGCCGCGGTGCGCCAGGAATAACGCGCCGCGTGGGTTTGCCTTTATCCGCCCACTGCTTTTTGTCCGGCTGATGGCTTTCTGCTTACT TTGTGAGTGCGTTCCTACGCGCAATCAGTACAATTGCGCCTTTTAGCGCCGGGTAGGGAAGCCTCCGGCTAACAGTCCAAGAGACGTCCATGCTCACCGG
Amino Acid Sequence
>RND transporter
MTDCSPRHFPQCLALARGSRLLSLGLSLTLLSACAIGPDYQRPQVAEPEHYKEAAGWRQANPSDALARGAWWELYGDAQLNGLVDRLNSANQSVAQAEAQ YRQAQALARSARGALFPTVDLSAGKTRASQGTGSSNSALSSSSSGIRDTYNTQLGVSWEADVWGKLRRSLEANEASAEASFADLAAMRLSQQSELVQNYL QLRVMDQQKRLLEATVAAYQRSLTMTENQYRAGVAGRDAVAQARTQLKSTQADLIDLIWQRAQLENAIAVLIGLPPAEFSLAETQDIPTLPQVPLGLPSQ LLERRPDIASAERSVISANANIGVAKAAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTEAVYDQTVAKYRQTVLDGFR EVENYLVQLKVLADEAVVRQEALDAARDSQRLTENQYKAGLVAYLDVVTVQATALSNERSVLTLLQSQLVTSVQLIAALGGGWDGQLQASTNP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site