Pseudomonas chlororaphis PCL1606, PCL1606_RS15325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
CTTGCGACGCTGACTAGGGCCAGCGCGCAAAAAAAGGAATGCTGTCATGGGGAATCACCCTATTGGCTGGGCTCGCCTGCTGCTGGTCGGCTGCGCCCTC GGTTCGCTCTTCAATCCTGCGGTCCAGGCGGCCGGCGATGGCCGGATCGTGCTCGATCGCGACGTGCAACCCCAGGCCGTCGGCCGCCCGCCGATGCACC CCGACCCCTACCCGACCACCGTCAACGCCAACCCGTCGGAGCGGGTCACCCAGATGACCGGCAACACCGAGCTGAGCGACGGCGATTTTGCCGGGGTCAG CAGCGGCGCCACCCTCGGTCGCAACGTCCTGCCCAACGGCACCAGCCTGCAAGGGCTGAATGTCGTCACCAACCCCAATGGCATGGCCGGCATGGGCGCC GGCCATGGCGGCGGCAGTGGCGGCGCCATCTCCAACACCATCAACCGTTCCCTGAGTTCGGGCCTGGCGCCCTTGGGCCGGCTGGCCGGAGGCCAATGAG
DNA Sequence for Gene
>PCL1606_RS15325
ATGAATCGCACCTTGCTATGGCTGGCCCTGGCTGGCTGCACGTCGGCCATGGCCGACCCGGGCCTGCGCACGCAGGACAGCGCTTCCATCGACAACGCCG GCGCCCGCTACCACGGCAACTTCAACCTCAACCAGGCCGCCGGCGACCAGCAGCAACAGACCAACACCCGCGCCATCGCCATCGGCACCGAGGCCCATGC CACCACCGTGGTGCGCCAGGCACTCGCGACACCGGCCAGCAGCGCGATCGACGCCAGCAGCCAGATCGGCGGCAACGCGTTCAGTAACGGCAACGGGGTC CTGGGCGTGAACCAGGGCGCCGGCGCCAACAACCAGATGGTCAATGCCCTGCGGGTGAGCATCAGTGCCCAGCCGCAAAGCGTCGACGACAGCGTCCTGT CCCAACAGAACGTGGCGCTGTTACCAGGCTCGGGAGCAACTGACATTCCGCAAGGCAGCCGCCAGGTCGTTACCAGCGACCAGGCCTTCACCGGCAGCCG AGGGGTGATTCAGCTGAACCAGAGTGCCGGGGTGGGGAACCGCATGGCTAACACCCTGAGCATACGGGTCGCAGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCAGCAGTGCGATTGGAAAAGTACCAACACTTAACCAACTTATAAGCACGGAGAAACACCATGAAACCTACAATGGCTCTCAAACCACTGGTGTTTG CCCTCGCCGCGGTCATGGCGATGGCTGCACAGGCTGGCAACGACGACAACCATGGCGGGCATAACGGCGGCCACAACGGTGGGCACAATGGCGGTCATGG CGGCCACGACCCACGTGGCCCGGACCTCAACACCCTGCTGCAGGTCACTGCCGGCGCCGGAGCCGCCGTCATCGATGTGCAAGACAGCAGCGGCAACGTT GTCAACAACCAGGGCACCAACAACAATGCCAAGGCCGACAACTCGCTGAACAACTCCAACGGCAACATGGGCGCCAACGTCGCCGCCGGCGACGGCAACC AGCAAGACAACGCCGCGGCCCTGGCCACCGCCGATGAAAGCTTCATCTTCGGCAGTGCGATAGCCGCTTCCAGCGCAACCCAGAACAACGTCGACAACTA
Amino Acid Sequence
>autotransporter adhesin
MNRTLLWLALAGCTSAMADPGLRTQDSASIDNAGARYHGNFNLNQAAGDQQQQTNTRAIAIGTEAHATTVVRQALATPASSAIDASSQIGGNAFSNGNGV LGVNQGAGANNQMVNALRVSISAQPQSVDDSVLSQQNVALLPGSGATDIPQGSRQVVTSDQAFTGSRGVIQLNQSAGVGNRMANTLSIRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site