Pseudomonas chlororaphis PCL1606, PCL1606_RS14835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
GAAAACTCTCCGGCGACAAGAACAAGGGGCTGTCGATCCGCGTCGAAGGCACGCCTTACGAGCGCCAGGGCTCCTTGCTGTTCACCGACGTGGCGGTGGA TCGCGGCACCGGGCAGATTGTCCTGCGCGGCAAGTTCGACAACGCCGACGGCACCCTGCTGCCGGGCATGTATGTGCGTGTGACGACGCCCCAGGGCACG GATAACCAGGCGATCCTCGTGCCGCAACGCGCGGTGCAACGCACCAGCGACGGCAGCGCCCAGGTGCTGGTGATCGGCGCGGACGAGCGGGTCGAGGCGC GCGCGGTGCGCACCGGCGCCATGCAGGGTTCGCGCTGGCAGATCAGCGAAGGCTTGAAGGCGGGGGACCAGGTCATCGTCGGTGGCCTGGCCGGCCTGCA ACCGGGTGCCAAGGTCGTGCCCAGCCAGCCCCAGGCCCAGGCTCAGTCTCAGATGCCTGACTCGAAACAGTAAGGCCGAGTTCGCCGCGAGGATTTTCCG
DNA Sequence for Gene
>PCL1606_RS14835
ATGTCTCAATTCTTCATCAAGCGCCCGAACTTCGCCTGGGTAGTGGCGCTGTTCATTTCACTGGCGGGCCTGCTGGTCATTTCCAAGCTGCCCGTGGCGC AGTACCCCAGCGTCGCGCCGCCGCAGATCACCATCACTGCCACTTATCCCGGCGCCTCGGCGAAGGTACTGGTGGACTCGGTCACCTCCGTGCTCGAGGA GTCGCTCAACGGGGCCAAGGGCCTGCTCTATTTCGAGTCGACCAACAACTCCAACGGCGTCGCCGAGATCGTGGTCACGTTCCAGCCCGGGACCGACCCG GACCTGGCCCAGGTAGACGTGCAGAACCGCCTGAAGAAGGCCGAGGCGCGCATGCCGCAAGCCGTGCTGACCCAGGGCCTGCAGGTCGAGCAGTCCAGCG CCGGTTTCCTGCTGATCTATGCGCTCAGCTACAAGGAAGGCAGCGCGAATGGCGACACCACGGCGCTGGGCGACTACGCCGCGCGCAACATCAACAACGA GCTGCGGCGCCTGCCGGGCGTCGGCAAGTTGCAGTTCTTCTCCTCCGAAGCGGCCATGCGCGTGTGGATCGACCCACAGAAACTGGTGGGCTACGGGCTG TCCATCGACGACGTGAGCAACGCAATCCGTGGCCAGAACGTCCAGGTGCCGGCCGGTGCCTTCGGCGCCGCCCCGGGCACCTCGGAGCAGGAGCTGACCG CGACGCTGGCGGTCAAGGGCACCCTGGACAATCCGGCCGAGTTTGGCCAGATCGTGCTGCGCGCCAATGAAGACGGCTCGCTGTTGAAACTGGCCGACGT CGCGCGCCTGGAAGTGGGCAAGGAGAGCTACAACCTGTCCTCGCGCCTGAACGGCAACCCGACCGTGGGCGGTGCGATCCAGCTGTCGCCGGGCGCCAAC GCCATCGAGACCGCGACCCTGGTGAAGGCGCGCCTTGCCGAGCTGTCGGCGTTCTTCCCCGAGAACATGGAGTATTCCGTTCCCTACGACACCTCGCGCT TCGTCGACGTGGCCATCGAGAAGGTGATCCACACCCTGATCGAGGCGATGGTCCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACGTGCGCTATAC CCTGATTCCATCCATCGTCGTGCCGGTGTGCCTGCTGGGTACGCTGCTGGTGATGTACCTGATGGGCTTCTCGGTGAACATGATGACCATGTTCGGCATG GTCCTGGCCATCGGTATCCTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAACGGATCATGGCCGAGGAAGGGCTGTCCCCGGTCGATGCGACGA TCAAGGCGATGCAGCAGGTCTCCGGGGCCATCATCGGCATCACCCTGGTGCTGTCGGCGGTGTTCCTGCCACTGGCGTTCATGGCCGGTTCGGTGGGGGT CATCTACCAGCAGTTTTCGGTGTCGCTGTCGGTATCGATCCTGTTCTCCGGTTTCCTCGCGCTGACCTTCACCCCGGCGCTGTGCGCCACGCTGCTCAAG CCGGTCCCCGAGGGGCATCACGAGAAGGGCGGTTTCTTCGGCGCCTTCAACCGTAGTTTCGCCCGCGTCACCGAGCGCTACTCGGTCCTCAACTCCAAGC TGGTGGCCCGCACCGCGCGTTTCATGCTGGTGTACGTCGGCATCATCGGCGTGCTCGGCTACTTCTATCTGCGCCTGCCGGAAGCCTTCGTGCCTTCGGA AGACCTGGGCTACATGGTGGTCGATGTGCAACTGCCGCCCGGCGCGGCGCGCTCCCGTACCGACGCCACCGGTGCAGAACTCGAACGCTTCCTCAAGTCC CGCGAGGCCGTGGCGTCGGTGTTCCTGGTGTCGGGCTTCAGCTTCTCCGGCCAGGGCGACAACGCTGCGCTGGCATTCCCGACGTTCAAGGACTGGTCGG AACGTAATGCGCAACAGTCGGCCGAGGCGGAAATCGCGGCGCTGAACGAACATTTCGCGGTCCCTGGCGACGGCACCATCATGGCCGTGTCGCCACCGCC TATCGACGGCCTGGGCAACTCCGGCGGTTTCGCGTTGCGCCTGATGGACCGTGGCGGCCTGGGTCGCGAGGCGTTGCTGCAAGCCCGGGATACGCTGCTG GGCCAGGTCCAGGGCAATCCCAAGTTCCTCTACGCGATGATGGAAGGCCTGGCCGAAGCGCCGCAACTGCGCCTGGTGATCGACCGTGAGAAGGCACGCA CCCTGGGTGTGAACTTCGAGACCATCAGCGGCACGCTGTCCTCGGCTTTCGGTTCGGACGTGATCAACGACTTCACCAACGCCGGTCGCCAGCAGCGGGT GGTGATCCAGGCCGAGCAGGGCTCGCGGATGACCCCGGAGAGCGTGCTCAAGCTGTATGTGCCCAACGCCAAGGGCGACCTGGTTCCGCTCAGCGCCTTC GTGACCACACGCTGGGAGGACGGGCCGGTACAACTGGTGCGCTACAACGGCTATCCGTCGATCCGTATCGTGGGCGACGCCGGCCCCGGTTTCAGTACCG GCCAGGCCATGGCGGAACTCGAGCACCTGGCCGCGCAACTGCCGGCGGGTATCGGCTACGAATGGACCGGCCTGTCCTATCAGGAGAAGGTCTCCAGCGG CCAGGCCACGCAGCTGTTCGCGCTTGCGATCCTGGTGGTGTTCCTGTTGCTGGTAGCCCTTTACGAGAGCTGGGCGATTCCCCTGACGGTGATGCTGATC GTCCCGATCGGTGCGATCGGCGCGGTGCTCGCGGTGATGGTGGTGGGCCTGCCGAACGACGTGTACTTCAAGGTCGGCCTGATCACCATCATCGGCCTGG CGGCGAAGAACGCGATCCTCATCGTCGAGTTCGCCAAGGAGCTGTGGGAGAAGGGCTACAGCCTGCGCGACGCGGCCATCGAGGCGGCCCGCCTGCGCTT CCGGCCGATCATCATGACCTCCATGGCCTTCATTCTCGGCGTGGTGCCCCTGGCGCTGGCGACCGGCGCGGGCGCGGCCAGCCAGCGTGCGATCGGCACC GGGGTGATCGGCGGGATGCTCAGCGCGACGCTGCTGGGTGTGCTGTTCGTACCGATCTGCTTTGTCTGGGTGCTGTCGCTGTTGCGCAGCAAGCCGGCCC CCATCGAACAACCGGCCGCGGCCCAGGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCATGCGGATCTCAGCCTTTTCTACGCTTCTGATCGCCATGGCGCTGGGGGGATGCTCACTGGCTCCCACCTATGAACGTCCCGTCGCGCCGGTGGCC GACAGCTGGAGCGGCGAAGCCGCCCAGCGCGGCAGCGCCATCAACGACCTGGCCTGGCAGACGTTTATCGTCGACCCGCAGTTGCGGCGCCTGATCGGCA CCGCGCTGGATAACAACCGCTCGCTGCGCCAGACGCTCCTGGACATCGAGCAGGCCCGCGCGCAGTACCGCATCCAGCGCGCCGACCGGGTGCCCGGGCT CAACGCGGGCGCCTCGGGCAATCGCCAGCGAGTACCGGCCGACCTGTCCAACAGCGGCAGGGCGGGAGTGGCCAGCAACTATCAGGTGGGCCTGTCGCTG CCGGAATACGAGCTGGACCTGTTCGGCCGGGTCAAGAGCCTCAGCGATGCCGCGCTGCAGGAGTACCTGGCCACCGAGGAGGCCGGGCGCGCGGCGCAGA
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSQFFIKRPNFAWVVALFISLAGLLVISKLPVAQYPSVAPPQITITATYPGASAKVLVDSVTSVLEESLNGAKGLLYFESTNNSNGVAEIVVTFQPGTDP DLAQVDVQNRLKKAEARMPQAVLTQGLQVEQSSAGFLLIYALSYKEGSANGDTTALGDYAARNINNELRRLPGVGKLQFFSSEAAMRVWIDPQKLVGYGL SIDDVSNAIRGQNVQVPAGAFGAAPGTSEQELTATLAVKGTLDNPAEFGQIVLRANEDGSLLKLADVARLEVGKESYNLSSRLNGNPTVGGAIQLSPGAN AIETATLVKARLAELSAFFPENMEYSVPYDTSRFVDVAIEKVIHTLIEAMVLVFLVMFLFLQNVRYTLIPSIVVPVCLLGTLLVMYLMGFSVNMMTMFGM VLAIGILVDDAIVVVENVERIMAEEGLSPVDATIKAMQQVSGAIIGITLVLSAVFLPLAFMAGSVGVIYQQFSVSLSVSILFSGFLALTFTPALCATLLK PVPEGHHEKGGFFGAFNRSFARVTERYSVLNSKLVARTARFMLVYVGIIGVLGYFYLRLPEAFVPSEDLGYMVVDVQLPPGAARSRTDATGAELERFLKS REAVASVFLVSGFSFSGQGDNAALAFPTFKDWSERNAQQSAEAEIAALNEHFAVPGDGTIMAVSPPPIDGLGNSGGFALRLMDRGGLGREALLQARDTLL GQVQGNPKFLYAMMEGLAEAPQLRLVIDREKARTLGVNFETISGTLSSAFGSDVINDFTNAGRQQRVVIQAEQGSRMTPESVLKLYVPNAKGDLVPLSAF VTTRWEDGPVQLVRYNGYPSIRIVGDAGPGFSTGQAMAELEHLAAQLPAGIGYEWTGLSYQEKVSSGQATQLFALAILVVFLLLVALYESWAIPLTVMLI VPIGAIGAVLAVMVVGLPNDVYFKVGLITIIGLAAKNAILIVEFAKELWEKGYSLRDAAIEAARLRFRPIIMTSMAFILGVVPLALATGAGAASQRAIGT GVIGGMLSATLLGVLFVPICFVWVLSLLRSKPAPIEQPAAAQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site