Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GATCTTCCTCTCGGTGTTCAACGCCATCGTCGCCATCGTGATCCAGATCGGACGGGTGGTGTTCTCCAGCGGCCGCGACGCGCTGTGGACACCCGGCATC AATCGCTTGTTCACGCGGATTCACCCGCGCTGGGATTCGCCGTGGCTGGCCACGCTGTTCCTGGCCGTTCCCTCGGCGGTGCTCAGTTTCAGCTCTAACC TGGCCGACCTGACCTCGTTCAGCGTGCTGCTGATCATGCTGGTGTATTTGATCGTCGCCCTCAGCGCGCTGATGAGCCGGGTACTGCTGCGCGATCGGGC GCACCCGTACCGTATGCCGCTGTGGCCGTTGCCGGCGCTGCTGGCGGTGCTCGGCGCCGGTTATCTGCTATTCAATCTGTTCCTGGACGCTTCGCTCAGG GACATCCTGGTGATCGTCGGCCTGCTGGCGCTGTCGGTGATCCTGTATGGCACCAACGGCCGGTTCAGTCCGGCGTTTCAGAAACTCTAAAGGAGCAATC
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DNA Sequence for Gene |
>PCL1606_RS13815
ATGCGCGCACGTCAATTGGGCATCAGCCTGGGCCTGGGTACTCCCGGCCCCTTCAACGCCATCACCGATGTCCCGGGGGTACGGGTGGGCCACAGCACGC TCAGGACCACGGTCGACGGCAAGCAGGTACGGACCGGGGTGACCCTGATCCAGCCCCGCGAAGGGTTCGCCCGGCTGCAACCCTGTTTCGCCGGCTGCCA TGTGCTCAACGGCAACGGCGACGCCACCGGGCTGGAGTGGGTCCGCGAGGCGGGCCTGCTGACCACGCCGCTGGCGATCACCAACACCCATAGCGTGGGC GTGGTGCGCGATGCGCTGATCGCCGAGGAGCGCAGCAGCCTGGCCGACCCCTCGGAGTATTGGTGCATGCCGGTGGTGATGGAGACCTACGATGGCCTGC TCAACGACATCTGGGGCCAGCATGTCGGTCCGCAGCAGGTCCGCGAGGCCCTGGCCAACGCCGAATCCGGCCCGGTGCAAGAGGGCGCGGTCGGCGGTGG CACCGGGATGATCTGCCATGAGTTCAAGGGCGGGATCGGCACGGCGTCGCGCCAGGTGCCGAAGGAGCGGGGTGGCTACACGGTCGGCGCGCTGGTGCAG GCCAACCACGGCAAGCGCGCGGAGTTGCGGGTCGATGGCTATCCGGTGGGACGGCAGTTGAACGATATCCCGTCGCCCTTCGCCCTGCGCGGCACGCCGG GCATGGGCTCGATCGTGGTGATCCTGGCCACGGACGCGCCCCTGCTGCCCCATCAGTGCCAGCGCCTGGCGCAACGGGCATCCATCGGCATTGCCCGCAC CGGTGGCGGCACCGAGGATTCCAGTGGCGACATCTTCCTGGCGTTCGCCACCGGCAACCGCGACCTGCCACCTTCGGCCTACGGGCGCCAGGGCGTGCCG TTCACCAGCCCCCTGGCGATGCTCAACAACGACTACATTTCCGAGCTGTTCAGCGCGGCGGCCGAAGCGGTGGAGGAAGCCATCGTCAACGCCCTGCTGG CGGGCGAACCGATGACCGCGGACAACGGCGCGAGCGTGCCGGCATTGACTGGCGATACCTTGTTGCAGGCCTTGAAACTAACTGGATGGAACAAACTTGT ATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTTAAACTGCGACACAGTCGGCAAAACAATGTTTAGAGTTATTTAATAATTAAATTCTAGATTGTCGGACAATTATCGCTGGGGGTTGAGGCTTAAAGA ATATTTCGACTTGTCAGTCATTGTTTTCGGGAGTTTGCAGGAACAGTAGAAATCAGGCGTCAAAAAGTAGTGGACGCCCGATTTCGAATTGTGTCAGCTT GCTTACGCCCAAATGGGGCGAGTGATAGGACGCTCTCGCCAGGGACCGTCGCTATCGGACAAAAACTGTTCCATTGATTACAAGGAAGTGTGTTTATGTC GAAAGTTAAAGCGAAAGCTATTGTGACCGCCGAACAAGAGCTCGTGCCATTGGCCGCAGCAAGTTCTGCGTATAACCAGATCAATAGCTTCAGCCATCAG TATGACCGTGGTGGCAATCTGACGGTCAATGGCAAGCCCTCCTACACAGTCGATCAGGCAGCCACCCAGCTGCTGCGCGACGGTGCCGCCTATCAGGATC
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Amino Acid Sequence |
>D-aminopeptidase
MRARQLGISLGLGTPGPFNAITDVPGVRVGHSTLRTTVDGKQVRTGVTLIQPREGFARLQPCFAGCHVLNGNGDATGLEWVREAGLLTTPLAITNTHSVG VVRDALIAEERSSLADPSEYWCMPVVMETYDGLLNDIWGQHVGPQQVREALANAESGPVQEGAVGGGTGMICHEFKGGIGTASRQVPKERGGYTVGALVQ ANHGKRAELRVDGYPVGRQLNDIPSPFALRGTPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDIFLAFATGNRDLPPSAYGRQGVP FTSPLAMLNNDYISELFSAAAEAVEEAIVNALLAGEPMTADNGASVPALTGDTLLQALKLTGWNKLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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