Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGCCCACGGCCTGTCGGCGGCGGCGCTGTTTATCCTCAGCGGCCAGCTGTACGAACGCACCCACACCCGCGACATGCGTGAAATGGGCGGCCTGTGG TCGAAGATCGCCTACCTGCCGGCAATCAGCCTGTTCTTCGCCGCCGCGTCCCTGGGCCTGCCGGGAACCGGCAACTTCGTCGGCGAGTTCCTGATCCTGA TCGGTACCTTCGCCAGCGCTCCGTGGATCACCGCGATCGCCACCTCCGGCCTGGTATTCGGTTCGGTCTACTCGCTGATCATGATCCACCGTGCCTACTT CGGTCCGGCCAAGTCGGACGCGGTACTGCACGGCATGGATGCTCGCGAACTGATCATGGTGCTCGGCCTGGCAGCGCTGCTGGTGTACCTCGGCGTCTAC CCGCAACCGTTCCTCGATACCTCTGCCGCTACGATGCATGGCGTGCAGCAATGGCTCGGCACCGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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DNA Sequence for Gene |
>PCL1606_RS11470
ATGGACTTTACGATTCAACACTTTATCGCGCTTGCGCCGCTGTTGATCACCAGCCTCACCATCGTTGTGGTGATGCTGGCGATCGCCTGGCGTCGCAACC ATGCGCAAACCTTCCTGCTGTCGGTCGCCGGCCTGAACCTGGCATTGCTGTCGATCCTGCCGGCCTTGAAAGTCGCCCCCCTGGCGGTGACTCCACTGTT GCAGATCGACCAGTTCGCCTGCCTGTACATGGCGCTGATCCTGGTCGCCACCCTGGCCTGCGTCACCCTCGCCCATGCCTACCTGGGCGACGGCGGCACC GGCTACCCGGGCAACCGCGAAGAACTGTACCTGCTGATCCTGATGGCCGCCGCCGGCGGCCTGGTGCTGGTCAGCGCGCAACACCTGGCCGGCTTGTTCA TCGGCCTGGAGCTGCTCTCGGTACCGGTCTACGGCCTGGTGGCGTATGCCTTCTTCAACAAGCGCTCGCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCCGCCGGCTCCGCGTTCCTGCTGTTCGGCATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCAACGGCATCGGCCAGGCCCTGGCCGCGACC GGCCTGCCTAGCCCGCTGGCCCAACTGGGCCTGGGCATGATGCTGATCGGCCTGGCCTTCAAGCTGTCGCTGGTGCCGTTCCACCTGTGGACCCCGGACG TCTACGAAGGCGCCCCGGCGCCGGTGGCGGCCTTTCTGGCCACCGCGAGCAAGGTGGCGGTGTTCGCGGTGATGGTGCGCCTGTTCCAGATCTCGCCAGT GGCCAGCAGCGGTGTCCTGAACACCGTGCTGACCGTGATCGCGATCGCCTCGATCCTGTTCGGTAACCTGCTGGCGCTGACCCAGAGCAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCGCACTTCGGTTACCTGCTGATCGCCCTGGTGGCGAGCAAGGGCCTGGCGATGGAAGCCATCGGCGTCTACCTGGTCA CCTACGTGATCACCAGCCTCGGCGCCTTCGGCGTGATTACCCTGATGTCCTCGCCTTACAAGGGCCGCGACGCGGACGCCCTGTACGAGTACCGGGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGTATTCCGCTGACCGCGGGCTTCATCGGCAAGTTCTACATC ATCGCCACCGGTGTCGAAGCGCATCAGTGGTGGCTGGTCGGTTCCCTGGTCCTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCGAACCTGCGCCGCGTCGACGCCCAGCTGCACTGGGAACAGAAGGCGGGTGGCGTGATGCTGCTGGCCATCGCGGTCCTGGCGTT CTTCCTGGGCGTCTACCCACAACCGCTGCTGACCCTGGTCCAGCAATCCGGTCTGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCTCAAGCACCTTCCGCGGTAAAACAAACGGCGCCTTCGGGCGCCGTTTTGTTTGCCCGGGAAAAACCCATGCCCTCCCCTTCCACGTGAAAGGAATT GCCTTTCCCACGTTCAAGAAATGCCCTACGTCCGTCCCTGTGCCCGCCATCTAAGGTCATTAAAAGGCGACCAACGACCGGTTCGACGCCTTGATCTTTC AGTCAATCCCCCAGAATATATACGTAGGTAACGTACAGAGCATGGACGCCCTTTTTATCGAACTGCCCCCGTTCCAGCGCCATCGCCAGGGCCTCCTGGA CGATGAGCTGTTTCACAGCCTGCAGCTGGAGTTGCTGAAGAACCCGCAGGCCGGCGACCTCATCGAAGGCACCGGCGGCTTGCGCAAGCTGCGCTTTGTC GATGAACGCCGGCACAAGGGCAAGCGCAGCGGGATCAGGGTGATTTATTACTGCTGGTGCGCGGGCGCTCAGTTCTGGCTCTTTACCCTTTACGCGAAGA
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Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MDFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHAQTFLLSVAGLNLALLSILPALKVAPLAVTPLLQIDQFACLYMALILVATLACVTLAHAYLGDGGT GYPGNREELYLLILMAAAGGLVLVSAQHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFNGIGQALAAT GLPSPLAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPVASSGVLNTVLTVIAIASILFGNLLALTQSNLKR LLGYSSIAHFGYLLIALVASKGLAMEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVEAHQWWLVGSLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAQLHWEQKAGGVMLLAIAVLAFFLGVYPQPLLTLVQQSGLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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