Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGATCGCCGGCGAATTCGACGGCGTGCGGGGCCCGGCCCGGACCTTCACCCCGATCGATGTCTGGGACCTGCGGCTCAATGCCGGCAAGCCCCTGACCC TCGACCTGCACCCGGGGCGCAACACCGCGCTGGTGGTGCTGCGCGGCACGGTCCAGGTCAACGGCCAGGAACTGGTGCGCGAAGGGCAGCTGGCGCTGTT CGAGCGCGACGGCGACCAGCTCGGCCTGGAAGCCAACAACGAGGCGGTGGTGCTGCTGCTCAGCGGCGAACCGATCGACGAGCCCATCGTCGGCCACGGG CCGTTCGTGATGAACAGCGAGGCAGAGATTCACCAGGCGTTCGCCGACTTCCAGTCCGGTCGCTTCGGGCAGATGCCCGGCTGACCATCGAACACCGGCC TGTACAGGAGGTACGAGCCGGGCTTCAGCGCCAGGGATGGCGGTTGCCTGAACGAACCATGCCTGGAACAGGCATGCCTTAACCCCAAGAGGAACTGCAG
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DNA Sequence for Gene |
>PCL1606_RS10360
ATGAATAACGTCAATGTGGCCAACTTCAATGGCGCCAAGCCGACCATCGATCCCAACGACGCGGCGATGCTGCTGATCGACCACCAGAGCGGGCTGTTCC AGATCGTCAAGGACATGGACGTACCGCAACTGCGGGCCAACGCCATCGCCCTGGCGAAAGCCGCGACCCTGCTGAAGATGCCGGTGATCACCACCGCTTC GGTGCCCCAGGGCCCCAACGGCCCGCTGATCCCGGAGATCCACCAGGAAGCGCCGCATGCCCAGTACGTGGCGCGCAAAGGTGAAATAAACGCCTGGGAC AATCCCGAGTTCCGCGCGGCGGTCAAGGCCACCGGCAAGAACACCCTGGTGATCGCCGGGACCCTGACCAGCGTGTGCCTGGCGTTTCCCTCGATCGCCG CGGCCTACGAAGGCTACAAGGTGTTCGCGGTGGTGGATGCCTCGGGCAACCACTCCAGCCTGGCCACTGATCTGACCATCGCCCGCCTGGCCCAGGCCGG GGTGGTGCCGATCGACATCATGGCTACGCTTTCCGAATTGCAGGGTTCGTGGAACCGCCCGGACGCCGAGCAATGGGCCGCGGTCTACGCCCAGGCCATG CCGCATTACCAGTTGCTGATCGAGAGCTACATCAAGGCTCAGCAAGTGGCCAACGAGCATGAAGTGCTGGACTCCCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGAGCACCCCAACGCCGACGTGGGTTCGGCATCGACAAGAAGCGAGGATTTCCCCATGACTTCCACTTACAAGCGCCTGGACAAGGACAACGCCGCCGT TCTGCTGGTCGATCATCAGGCCGGCTTGCTGTCCCTGGTCCGTGACATCGATCCGGACAAGTTCAAGAACAACGTGCTGGCCCTGGCCGACCTGGCCAAG TACTTCAAGCTGCCGACCATCCTCACCACCAGTTTCGAAACCGGCCCCAACGGCCCGCTGGTGCCCGAGCTCAAGGCGCTGTTCCCGGACGCGCCCTACA TCGCCCGCCCGGGCCAGATCAATGCCTGGGACAACGAAGACTTCGTCAAGGCGATCAAGGCCACCGGCAAGAAGCAACTGATCATCGCCGGCGTGGTGAC CGAGGTCTGCGTGGCGTTCCCGGCGCTGTCGGCGCTGGAAGAAGGGTTCGAGGTGTTCGTGGTGACCGACGCTTCCGGCACCTTCAACGAACTGACCCGC
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Amino Acid Sequence |
>nicotinamidase
MNNVNVANFNGAKPTIDPNDAAMLLIDHQSGLFQIVKDMDVPQLRANAIALAKAATLLKMPVITTASVPQGPNGPLIPEIHQEAPHAQYVARKGEINAWD NPEFRAAVKATGKNTLVIAGTLTSVCLAFPSIAAAYEGYKVFAVVDASGNHSSLATDLTIARLAQAGVVPIDIMATLSELQGSWNRPDAEQWAAVYAQAM PHYQLLIESYIKAQQVANEHEVLDSQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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