Pseudomonas chlororaphis PCL1606, PCL1606_RS09510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGGGTTTCGCGGGCCCGCAGCAGGCTGTCGTGAATCTGCGTGCGCAATTCGTCCGCCTGGTCGCCGGCCAGGGTGGCGGTGTGTTCCAGCAGGCGTTC CGTGTCGCTGACCAGTGCCTGAAAGTCCGCCATCAGTGTTTCTTGCGCTGTCTTGGTGGTTTTGCTGGCCATGGTGATCTCCTTAGTGGCGTTCTGAAGG GTTCGAGTATGAGCCCTGCGCGAAGGTTCAGTGCAATTGTCTGGTACAGCTTTTGCTGTGTCCTGGTGCGTAAACACGGGTGGTTGCGCCGAAAGCGCGC AGGAAGCGGCGCATGAGCGGCAAAACCTTACCCTAAAAAATCAACACTTTTGGAAACGCCTTCGAGCGCCACACCTTTTCGAACAAACGCTGCGCCAAAA CGGGTCGCAATCGAGGGGTCGACAGGACCTTCGGTGCCAATTTGGTGCAAAACCTTCGAGCGGCTCGGGGATTGTTCCTGACATCAGGTCTGCCCATTCC
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| DNA Sequence for Gene |
>PCL1606_RS09510
ATGGAAAATCTGCAAAGCGCCGTGGACACTCTGGTCCATGGCTCCAACACCCTGTTCATCCTCATCGGTGCGGTCATGGTCCTGGCCATGCATGCCGGCT TCGCCTTCCTCGAAGTGGGCACCGTGCGCCAGAAGAACCAGGTCAATGCGTTGTCGAAGATCCTCAGCGACTTCGCCGTCTCGACCCTGGCCTATTTCTT TATAGGCTATTGGATCTCCTACGGCGTCAGCTTCCTGCAACCGGCGGCGGTGATCAGTGCCGATCACGGTTATGGGCTGGTGAAATTCTTCTTCCTGCTG ACGTTCGCCGCGGCCATTCCGGCGATCATCTCCGGCGGTATCGCCGAGCGGGCGCGGTTCGTCCCGCAGCTCTGCGCCACAGCGCTGATCGTGGCCTTCA TCTATCCCTTCTTCGAAGGCCTGGTGTGGAACGGCAACTACGGCCTGCAAGCCTGGTTGCAGGCGAGCTTCGGCGCGGGCTTCCATGATTTCGCCGGTTC CGTGGTGGTGCACGCCATGGGCGGTTGGCTGGCGCTGGCGGCGGTGCTGTTGCTCGGCGCGCGCAATGGCCGCTACCGCGACGGCAAGCTGGTGGCGTTC GCGCCATCGAGCATTCCGTTCCTGGCCCTGGGGTCGTGGATCCTGATCGTCGGCTGGTTCGGCTTCAACGTGATGAGCGCGCAGACCTTGCAGGCGGTCA GCGGGCTGGTGGCGGTGAACTCGCTGATGGCCATGGTCGGCGGCACCGTGGCGGCGCTGATCGTCGGCCGCAACGACCCGGGCTTCCTGCACAACGGACC GTTGGCCGGGCTGGTGGCGATCTGTGCAGGGTCCGACCTGATGCATCCGGTCGGCGCCTTGATCACCGGCGCGATTGCCGGGGCCTTGTTCGTCTGGTGC TTCATCGCGACCCAGACCCGCTGGAAGATCGACGATGTGCTGGGTGTCTGGCCACTGCACGGGTTGTGCGGCGTGTGGGGCGGTATCGCCTGCGGGATCT TCGGCCAGAGCGCCTTGGGCGGCCTGGGCGGGGTCAGCCTGGCCAGCCAGTTGATCGGCACCGGCCTGGGCGTGCTGGTGGCGCTGCTCGGCGGCTTCCT GGTGTATGGCGCGATCAAGGCCTGTTGCGGCTTGCGCCTGACCCAGGAGCAGGAGTACTACGGCGCCGACCTGTCGCTGCACAAGATCGGCGCGGTCAGC CAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGCGTGGCCCCGGCGGGCGCTGCCTGCCGGGGCCGGCGGATCATTGGCCGCCAAGCAGGCGCGCCTCCGAGGCCTCGATGGCGGTCAGCGGGCCGGAC ATCAAGACCGTATCGCCGGATTGCAGCCGGGTGCTGGCGGTCGGTTCCAGGTCCTGGCCGGCCCGTTGCACACCTTGCACATCCACCCCCAGTTGCTCCA GCGCCAGCTCGCCCAGGGCCAGGTCGCAGGCGTGGGCGGTGCTGCTCAGGTTCACCGCATGCATCAGCACCCGCGGCTGGCCGCGATTGTTCAGCAGGTC GGTCTGCGCGCCGTGGTAGAAGCCGTGCAGCAAGCGATAACGGGTGCGGCGCACTTCATCGACCTTGGCCTGCACCTGGGCTTCGGGCAAACCGAGCATG ACCAGGGCGTGGGAGGCCAGCATCAGGCTCGACTCCAGCAGCTCCGGCACCACTTCGCTGGCGCCGGCGGCCTTCAGTTCGGTCAGTTGGCTGTCGTCGC
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| Amino Acid Sequence |
>ammonium transporter
MENLQSAVDTLVHGSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAVSTLAYFFIGYWISYGVSFLQPAAVISADHGYGLVKFFFLL TFAAAIPAIISGGIAERARFVPQLCATALIVAFIYPFFEGLVWNGNYGLQAWLQASFGAGFHDFAGSVVVHAMGGWLALAAVLLLGARNGRYRDGKLVAF APSSIPFLALGSWILIVGWFGFNVMSAQTLQAVSGLVAVNSLMAMVGGTVAALIVGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALITGAIAGALFVWC FIATQTRWKIDDVLGVWPLHGLCGVWGGIACGIFGQSALGGLGGVSLASQLIGTGLGVLVALLGGFLVYGAIKACCGLRLTQEQEYYGADLSLHKIGAVS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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